6on9

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'''Unreleased structure'''
 
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The entry 6on9 is ON HOLD
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==Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, tetragonal form==
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<StructureSection load='6on9' size='340' side='right'caption='[[6on9]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6on9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ON9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ON9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.995&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6on9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6on9 OCA], [https://pdbe.org/6on9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6on9 RCSB], [https://www.ebi.ac.uk/pdbsum/6on9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6on9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ZIG8_CAEEL ZIG8_CAEEL] Together with zig-5, required postembryonically to maintain the position of ASI and ASH head neuron cell bodies and ventral nerve cord axons of PVQ, PVP and HSN neurons by preventing their displacement that could occur during body growth and movement. May act by reducing L1CAM-like protein sax-7 (long isoform) adhesion.<ref>PMID:22829780</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The evolution of complex nervous systems was accompanied by the expansion of numerous protein families, including cell-adhesion molecules, surface receptors, and their ligands. These proteins mediate axonal guidance, synapse targeting, and other neuronal wiring-related functions. Recently, 32 interacting cell surface proteins belonging to two newly defined families of the Ig superfamily (IgSF) in fruit flies were discovered to label different subsets of neurons in the brain and ventral nerve cord. They have been shown to be involved in synaptic targeting and morphogenesis, retrograde signaling, and neuronal survival. Here, we show that these proteins, Dprs and DIPs, are members of a widely distributed family of two- and three-Ig domain molecules with neuronal wiring functions, which we refer to as Wirins. Beginning from a single ancestral Wirin gene in the last common ancestor of Bilateria, numerous gene duplications produced the heterophilic Dprs and DIPs in protostomes, along with two other subfamilies that diversified independently across protostome phyla. In deuterostomes, the ancestral Wirin evolved into the IgLON subfamily of neuronal receptors. We show that IgLONs interact with each other and that their complexes can be broken by mutations designed using homology models based on Dpr and DIP structures. The nematode orthologs ZIG-8 and RIG-5 also form heterophilic and homophilic complexes, and crystal structures reveal numerous apparently ancestral features shared with Dpr-DIP complexes. The evolutionary, biochemical, and structural relationships we demonstrate here provide insights into neural development and the rise of the metazoan nervous system.
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Authors: Cheng, S., Kurleto, J.D., Ozkan, E.
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Family of neural wiring receptors in bilaterians defined by phylogenetic, biochemical, and structural evidence.,Cheng S, Park Y, Kurleto JD, Jeon M, Zinn K, Thornton JW, Ozkan E Proc Natl Acad Sci U S A. 2019 May 14;116(20):9837-9842. doi:, 10.1073/pnas.1818631116. Epub 2019 May 1. PMID:31043568<ref>PMID:31043568</ref>
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Description: Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, tetragonal form
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Ozkan, E]]
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<div class="pdbe-citations 6on9" style="background-color:#fffaf0;"></div>
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[[Category: Cheng, S]]
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== References ==
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[[Category: Kurleto, J.D]]
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Caenorhabditis elegans]]
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[[Category: Large Structures]]
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[[Category: Cheng S]]
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[[Category: Kurleto JD]]
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[[Category: Ozkan E]]

Current revision

Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, tetragonal form

PDB ID 6on9

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