4r40

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:43, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4r40' size='340' side='right'caption='[[4r40]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='4r40' size='340' side='right'caption='[[4r40]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4r40]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R40 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R40 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4r40]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R40 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.496&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4pwz|4pwz]], [[4pwt|4pwt]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r40 OCA], [https://pdbe.org/4r40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r40 RCSB], [https://www.ebi.ac.uk/pdbsum/4r40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r40 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tolB, y3055, YPO1124, YP_1032 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92]), excC, pal, y3054, YPO1125, YP_1031 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r40 OCA], [http://pdbe.org/4r40 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r40 RCSB], [http://www.ebi.ac.uk/pdbsum/4r40 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r40 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TOLB_YERPE TOLB_YERPE]] Involved in the TonB-independent uptake of proteins (By similarity).
+
[https://www.uniprot.org/uniprot/TOLB_YERPE TOLB_YERPE] Involved in the TonB-independent uptake of proteins (By similarity).
==See Also==
==See Also==
Line 19: Line 17:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Yersinia pestis co92]]
+
[[Category: Yersinia pestis CO92]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A]]
+
[[Category: Kim Y]]
-
[[Category: Kim, Y]]
+
[[Category: Maltseva N]]
-
[[Category: Maltseva, N]]
+
[[Category: Osipiuk J]]
-
[[Category: Osipiuk, J]]
+
-
[[Category: Alpha-beta fold and beta propeller fold]]
+
-
[[Category: Csgid]]
+
-
[[Category: National institute of allergy and infectious disease]]
+
-
[[Category: Niaid]]
+
-
[[Category: Protein transport]]
+
-
[[Category: Translocation and peptidoglycan-associated outer membrane lipoprotein]]
+

Current revision

Crystal Structure of TolB/Pal complex from Yersinia pestis.

PDB ID 4r40

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools