Chemotaxis protein 3D structures

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(New page: ==3D structures of chemotaxis protein == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *CheY **1ab6, [[1d4z]...)
Current revision (08:19, 27 January 2025) (edit) (undo)
 
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Line 4: Line 4:
{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
-
*CheY
+
*CheY or response regulator receiver protein
-
**[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]], [[6chy]], [[5chy]] – EcCheY (mutant) – ''Escherichia coli''<BR />
+
**[[6tg7]] - EcCheY – ''Escherichia coli''<br />
 +
**[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]], [[6chy]], [[5chy]] – EcCheY (mutant)<BR />
 +
**[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR />
 +
**[[1djm]] – EcCheY – NMR<BR />
**[[1tmy]], [[2tmy]], [[3tmy]], [[4tmy]] - TmCheY – ''Thermotoga maritima''<br />
**[[1tmy]], [[2tmy]], [[3tmy]], [[4tmy]] - TmCheY – ''Thermotoga maritima''<br />
**[[4qyw]], [[6c40]] - TmCheY (mutant) <br />
**[[4qyw]], [[6c40]] - TmCheY (mutant) <br />
Line 13: Line 16:
**[[3gwg]] – HpCheY - ''Helicobacter pylori''<BR />
**[[3gwg]] – HpCheY - ''Helicobacter pylori''<BR />
**[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR />
**[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR />
-
**[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR />
 
-
**[[1djm]] – EcCheY – NMR<BR />
 
**[[2chy]] – StCheY - ''Salmonella typhimurium'' <br />
**[[2chy]] – StCheY - ''Salmonella typhimurium'' <br />
**[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br />
**[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br />
 +
**[[7x1k]] – CheY – ''Listeria monocytogenes'' <br />
 +
**[[6exr]] – CheY – ''Pyrococcus horikoshii''<br />
*''CheY complexes''
*''CheY complexes''
**[[1zdm]] – EcCheY + Xe<BR />
**[[1zdm]] – EcCheY + Xe<BR />
-
**[[3h1e]] - HpCheY + BeF3 + Mn<BR />
 
**[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR />
**[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR />
-
**[[4hns]] - VcCheY + BeF3 + Mg<br />
 
-
**[[4lx8]] - VcCheY + Mg<br />
 
-
**[[6ekg]], [[6ekh]] – CheY + Mg – ''Methaococcus maripaludis''<br />
 
**[[1fqw]] - EcCheY + BeF3 + Mn<br />
**[[1fqw]] - EcCheY + BeF3 + Mn<br />
**[[3rvj]], [[3rvk]], [[3rvl]], [[3rvm]], [[3rvn]], [[3rvo]], [[3rvp]], [[3rvq]], [[3rvr]], [[3rvs]] - EcCheY (mutant) + BeF3 + Mn<br />
**[[3rvj]], [[3rvk]], [[3rvl]], [[3rvm]], [[3rvn]], [[3rvo]], [[3rvp]], [[3rvq]], [[3rvr]], [[3rvs]] - EcCheY (mutant) + BeF3 + Mn<br />
Line 33: Line 32:
**[[2b1j]], [[1f4v]] - EcCheY + flagellar motor switch protein FLIM N terminal<br />
**[[2b1j]], [[1f4v]] - EcCheY + flagellar motor switch protein FLIM N terminal<br />
**[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR />
**[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR />
-
**[[1u0s]] - TmCheY response regulating domain + CheA P2 domain <BR />
 
**[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR />
**[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR />
**[[1kmi]] - EcCheY + CheZ<BR />
**[[1kmi]] - EcCheY + CheZ<BR />
Line 40: Line 38:
**[[2che]], [[2chf]] – StCheY + Mg<br />
**[[2che]], [[2chf]] – StCheY + Mg<br />
**[[4iga]] - TmCheY + flagellar motor switch protein FLIM peptide<br />
**[[4iga]] - TmCheY + flagellar motor switch protein FLIM peptide<br />
 +
**[[1u0s]] - TmCheY response regulating domain + CheA P2 domain <BR />
 +
**[[3h1e]] - HpCheY + BeF3 + Mn<BR />
 +
**[[4hns]] - VcCheY + BeF3 + Mg<br />
 +
**[[4lx8]] - VcCheY + Mg<br />
 +
**[[6ekg]], [[6ekh]] – MmCheY + Mg – ''Methaococcus maripaludis''<br />
 +
**[[7od9]] – MmCheY + CheF C-terminal<br />
*Chey-like
*Chey-like
Line 53: Line 57:
**[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR />
**[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR />
**[[3hzh]] – CheX + Che-3 – ''Borrelia burgdorferi''<br />
**[[3hzh]] – CheX + Che-3 – ''Borrelia burgdorferi''<br />
 +
**[[6vpw]] – CheX – ''Vibrio vulnificus''<br />
*CheC
*CheC
Line 72: Line 77:
**[[1fwp]] – EcCheA – NMR<br />
**[[1fwp]] – EcCheA – NMR<br />
 +
**[[8c5v]] – EcCheA + CheW – Cryo EM<br />
 +
**[[6s1k]] – EcCheA + CheW + methyl-accepting Che 1 – Cryo EM<br />
 +
**[[3ja6]] – EcCheA + CheW + methyl-accepting Che 2 – Cryo EM<br />
**[[1b3q]] – TmCheA dimerization, kinase and regulatory domains <BR />
**[[1b3q]] – TmCheA dimerization, kinase and regulatory domains <BR />
-
**[[1i5n]] – StCheA P1 domain<br />
 
**[[1i58]], [[1i59]], [[1i5a]], [[1i5b]], [[1i5d]] - TmCheA P4 domain + ATP analog<br />
**[[1i58]], [[1i59]], [[1i5a]], [[1i5b]], [[1i5d]] - TmCheA P4 domain + ATP analog<br />
**[[6mi6]] - TmCheA P4 domain + ADP analog<br /
**[[6mi6]] - TmCheA P4 domain + ADP analog<br /
**[[1i5c]] - TmCheA P4 domain (mutant) + ADP<br />
**[[1i5c]] - TmCheA P4 domain (mutant) + ADP<br />
 +
**[[8oyq]], [[8oyz]], [[8oz9]], [[8p3n]], [[8p3r]], [[8p59]], [[8pf2]] - TmCheA ATP-binding domain 355-540 + inhibitor<br />
**[[1tqg]] – TmCheA phosphotransferase domain<br />
**[[1tqg]] – TmCheA phosphotransferase domain<br />
**[[2ld6]] – TmCheA HPT domain - NMR<BR />
**[[2ld6]] – TmCheA HPT domain - NMR<BR />
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**[[4xiv]] - TmCheA kinase and dimerization domains<br />
**[[4xiv]] - TmCheA kinase and dimerization domains<br />
**[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br />
**[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br />
 +
**[[1i5n]] – StCheA P1 domain<br />
 +
**[[6y1y]] – CheA – ''Treponema denticola''<br />
*CheB
*CheB
Line 93: Line 103:
**[[1k0s]] – TmCheW<br />
**[[1k0s]] – TmCheW<br />
**[[2ho9]] – EcCheW - NMR<BR />
**[[2ho9]] – EcCheW - NMR<BR />
 +
 +
*PomA, PomB
 +
 +
**[[8brd]], [[8bri]] – VaPomA + flagellar motor protein – ''Vibrio alginolyticus'' – Cryo EM
 +
**[[8zyv]], [[8zyw]] – VaPomA + PomB – Cryo EM
 +
**[[8zyz]], [[8zz0]] – VaPomA + PomB (mutant) – Cryo EM
 +
**[[9ijm]] – VaPomA + PomB + phenamil – Cryo EM
*Aspartate chemotaxis receptor
*Aspartate chemotaxis receptor
Line 104: Line 121:
*Methyl-accepting chemotaxis protein
*Methyl-accepting chemotaxis protein
-
**[[2m7u]], [[2m7v]] – TeMche – ''Thermosynechococcus elongatus''<br />
+
**[[2m7u]], [[2m7v]], [[3vv4]], [[6upp]] – TeMche GAF domain 435-584 – ''Thermosynechococcus elongatus''<br />
-
**[[3vv4]] – TeMche GAF domain<br />
+
**[[4fof]], [[4glq]], [[6p58]], [[6pru]], [[6pry]] – TeMche GAF domain (mutant)<br />
-
**[[4fof]], [[4glq]] – TeMche GAF domain (mutant)<br />
+
**[[3w2z]] – Mche residues 221-397 – Nostoc<br />
**[[3w2z]] – Mche residues 221-397 – Nostoc<br />
**[[3g67]] – TmMche<BR />
**[[3g67]] – TmMche<BR />
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**[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR />
**[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR />
**[[6iop]] - VcMche LBD <br />
**[[6iop]] - VcMche LBD <br />
 +
**[[8bsb]] - VcMche LBD + Lys<br />
 +
**[[8bsa]] - VcMche LBD + Arg<br />
**[[6ceq]] - VcMche PAS 2 domain <br />
**[[6ceq]] - VcMche PAS 2 domain <br />
**[[6dtm]], [[6e09]], [[6e0a]] – HpMche Tlpa LBD <br />
**[[6dtm]], [[6e09]], [[6e0a]] – HpMche Tlpa LBD <br />
 +
**[[6mni]] - Mche cache domain 28-293 – ''Pseudomonas syringae''<br />
 +
**[[6pzj]] - Mche N-terminal domain 43-304 – ''Leptospira interrogans''<br />
 +
**[[7w0w]] - Mche – ''Bacillus velezensis'' <br />
*Methyl-accepting chemotaxis protein complex
*Methyl-accepting chemotaxis protein complex
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**[[3atp]] - EcMcheI LBD + serine<BR />
**[[3atp]] - EcMcheI LBD + serine<BR />
**[[4z9h]], [[4z9i]] - EcMcheII LBD + aspartic acid<br />
**[[4z9h]], [[4z9i]] - EcMcheII LBD + aspartic acid<br />
-
**[[5ave]], [[6ioq]], [[6ior]], [[6ios]], [[6iot]], [[6iou]] - VcMche LBD + amino acid<br />
+
**[[5ave]], [[6ioq]], [[6ior]], [[6ios]], [[6iot]], [[6iou]], [[6iov]] - VcMche LBD + amino acid<br />
**[[5avf]] - VcMche LBD + taurine<br />
**[[5avf]] - VcMche LBD + taurine<br />
**[[5t7m]], [[5t65]], [[5ltx]], [[5lto]], [[5lt9]] - PaMche LBD + amino acid – ''Pseudomonas aeruginosa''<br />
**[[5t7m]], [[5t65]], [[5ltx]], [[5lto]], [[5lt9]] - PaMche LBD + amino acid – ''Pseudomonas aeruginosa''<br />
**[[5ltv]] - PaMche LBD + GABA<br />
**[[5ltv]] - PaMche LBD + GABA<br />
-
**[[6f9g]] - Mche LBD + putrescine – ''Pseudomonas putida''<br />
+
**[[6f9g]] - PpMche LBD + putrescine – ''Pseudomonas putida''<br />
 +
**[[8bmv]] - PpMche LBD + uric acid<br />
**[[5zoh]] - Mche + biliverdin - Nostoc<br />
**[[5zoh]] - Mche + biliverdin - Nostoc<br />
 +
**[[6w3o]], [[6w3r]], [[6w3p]], [[6w3s]] - CjMche LBD + Leu derivative – ''Campylobacter jejuni''<br />
 +
**[[6w3t]], [[6w3x]] - CjMche LBD + Val derivative <br />
 +
**[[6w3v]], [[6w3y]] - CjMche LBD + amino acid <br />
 +
**[[7psg]] - Mche LBD + betaine – ''Pectobacterium atrosepticum''<br />
 +
**[[6d8v]] - SmMche X 38-306 – ''Sinorhizobium meliloti''<br />
 +
**[[8f7n]] - SmMche LBD 39-424 + Yb<br />
 +
**[[8fyv]], [[8vl8]] – MChe + Ser - ''Salmonella enterica''<br />
*''Heme-containing methyl-accepting chemotaxis protein''
*''Heme-containing methyl-accepting chemotaxis protein''
Line 152: Line 181:
**[[1yab]] – TmFLIN<BR />
**[[1yab]] – TmFLIN<BR />
-
*Chemotaxis protein MotB
+
*Chemotaxis protein MotB or motility protein B, MotA
**[[3cyp]], [[3imp]], [[3s02]], [[3s03]], [[3s06]], [[3s0h]], [[3s0w]], [[3s0y]] – HpMotB C terminal<br />
**[[3cyp]], [[3imp]], [[3s02]], [[3s03]], [[3s06]], [[3s0h]], [[3s0w]], [[3s0y]] – HpMotB C terminal<br />
**[[3cyq]] – HpMotB C terminal + N-acetylmuramic acid<BR />
**[[3cyq]] – HpMotB C terminal + N-acetylmuramic acid<BR />
 +
**[[5y3z]], [[5y40]] – StMotB periplasmic domain (mutant) <br />
**[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br />
**[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br />
 +
**[[6ysl]] – BsMotB + MotA – Cryo EM<br />
 +
**[[6ykm]] – CjMotB + MotA – Cryo EM<br />
 +
**[[8gqy]] – MotA – ''Aquifex aeolicus'' - Cryo EM<br />
 +
*Chemotaxis protein CKI
*Chemotaxis protein CKI

Current revision

3D structures of chemotaxis protein

Updated on 27-January-2025


Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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