6oqp
From Proteopedia
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(New page: '''Unreleased structure''' The entry 6oqp is ON HOLD Authors: Description: Category: Unreleased Structures) |
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| - | '''Unreleased structure''' | ||
| - | + | ==U-AITx-Ate1== | |
| + | <StructureSection load='6oqp' size='340' side='right'caption='[[6oqp]]' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6oqp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinia_tenebrosa Actinia tenebrosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OQP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OQP FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6oqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oqp OCA], [https://pdbe.org/6oqp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6oqp RCSB], [https://www.ebi.ac.uk/pdbsum/6oqp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6oqp ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Sea anemone venoms have long been recognised as a rich source of peptides with interesting pharmacological and structural properties. Our recent transcriptomic studies of the Australian sea anemone Actinia tenebrosa have identified a novel 13-residue peptide, U-AITx-Ate1. U-AITx-Ate1 contains a single disulfide bridge and bears no significant homology to previously reported amino acid sequences of peptides from sea anemones or other species. We have produced U-AITx-Ate1 using solid-phase peptide synthesis, followed by oxidative folding and purification of the folded peptide using reversed-phase high-performance liquid chromatography. The solution structure of U-AITx-Ate1 was determined based on two-dimensional nuclear magnetic resonance spectroscopic data. Diffusion-ordered NMR spectroscopy revealed that U-AITx-Ate1 was monomeric in solution. Perturbations in the 1D (1)H NMR spectrum of U-AITx-Ate1 in the presence of dodecylphosphocholine micelles together with molecular dynamics simulations indicated an interaction of U-AITx-Ate1 with lipid membranes, although no binding was detected to 100% POPC and 80% POPC: 20% POPG lipid nanodiscs by isothermal titration calorimetry. Functional assays were performed to explore the biological activity profile of U-AITx-Ate1. U-AITx-Ate1 showed no activity in voltage-clamp electrophysiology assays and no change in behaviour and mortality rates in crustacea. Moderate cytotoxic activity was observed against two breast cancer cell lines. | ||
| - | + | Structural and functional characterisation of a novel peptide from the Australian sea anemone Actinia tenebrosa.,Elnahriry KA, Wai DCC, Krishnarjuna B, Badawy NN, Chittoor B, MacRaild CA, Williams-Noonan BJ, Surm JM, Chalmers DK, Zhang AH, Peigneur S, Mobli M, Tytgat J, Prentis P, Norton RS Toxicon. 2019 Jul 11;168:104-112. doi: 10.1016/j.toxicon.2019.07.002. PMID:31302115<ref>PMID:31302115</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 6oqp" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Actinia tenebrosa]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Elnahriry KA]] | ||
| + | [[Category: Norton RS]] | ||
| + | [[Category: Wai DCC]] | ||
Current revision
U-AITx-Ate1
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