This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6oqq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6oqq" [edit=sysop:move=sysop])
Current revision (14:52, 13 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6oqq is ON HOLD
+
==Legionella pneumophila SidJ/Saccharomyces cerevisiae calmodulin complex==
 +
<StructureSection load='6oqq' size='340' side='right'caption='[[6oqq]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6oqq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila Legionella pneumophila] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OQQ FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.102&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6oqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oqq OCA], [https://pdbe.org/6oqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6oqq RCSB], [https://www.ebi.ac.uk/pdbsum/6oqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6oqq ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SIDJ_LEGPH SIDJ_LEGPH] Glutamylase that mediates the covalent attachment of glutamate moieties to SdeA on one of the catalytic residues that is required for its mono-ADP-ribosyltransferase activity (PubMed:31330532, PubMed:31330531). In turn, inhibits SdeA ubiquitinating activity. Glutamylates also related SdeB, SdeC and SidE (PubMed:31330531, PubMed:31123136). Glutamylase activity only occurs in the host since it requires host calmodulin (PubMed:28497808, PubMed:31330532, PubMed:31330531, PubMed:31123136). May also reverse the SdeA-mediated substrate ubiquitination by cleaving the phosphodiester bond that links phosphoribosylated ubiquitin to protein substrates via its deubiquitinase activity (PubMed:28497808).<ref>PMID:28497808</ref> <ref>PMID:31123136</ref> <ref>PMID:31330531</ref> <ref>PMID:31330532</ref>
-
Authors: Tomchick, D.R., Tagliabracci, V.S., Black, M., Osinski, A.
+
==See Also==
-
 
+
*[[Calmodulin 3D structures|Calmodulin 3D structures]]
-
Description: Legionella pneumophila SidJ/Saccharomyces cerevisia calmodulin complex
+
== References ==
-
[[Category: Unreleased Structures]]
+
<references/>
-
[[Category: Tagliabracci, V.S]]
+
__TOC__
-
[[Category: Tomchick, D.R]]
+
</StructureSection>
-
[[Category: Osinski, A]]
+
[[Category: Large Structures]]
-
[[Category: Black, M]]
+
[[Category: Legionella pneumophila]]
 +
[[Category: Saccharomyces cerevisiae S288C]]
 +
[[Category: Black M]]
 +
[[Category: Osinski A]]
 +
[[Category: Tagliabracci VS]]
 +
[[Category: Tomchick DR]]

Current revision

Legionella pneumophila SidJ/Saccharomyces cerevisiae calmodulin complex

PDB ID 6oqq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools