This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5lwj
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.== | ==Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.== | ||
| - | <StructureSection load='5lwj' size='340' side='right'caption='[[5lwj | + | <StructureSection load='5lwj' size='340' side='right'caption='[[5lwj]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5lwj]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LWJ OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5lwj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LWJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LWJ FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AP7:N1-PROTONATED+ADENOSINE-5-MONOPHOSPHATE'>AP7</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lwj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lwj OCA], [https://pdbe.org/5lwj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lwj RCSB], [https://www.ebi.ac.uk/pdbsum/5lwj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lwj ProSAT]</span></td></tr> |
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 22: | Line 22: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Duchardt-Ferner | + | [[Category: Synthetic construct]] |
| - | [[Category: Hantke | + | [[Category: Duchardt-Ferner E]] |
| - | [[Category: Kreutz | + | [[Category: Hantke K]] |
| - | [[Category: Nasiri | + | [[Category: Kreutz C]] |
| - | [[Category: Ohlenschlaeger | + | [[Category: Nasiri AH]] |
| - | [[Category: Weickhmann | + | [[Category: Ohlenschlaeger O]] |
| - | [[Category: Woehnert | + | [[Category: Weickhmann AK]] |
| - | [[Category: Wolter | + | [[Category: Woehnert J]] |
| - | [[Category: Wunderlich | + | [[Category: Wolter AC]] |
| - | + | [[Category: Wunderlich CH]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.
| |||||||||||
