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| ==NMR structure of the calcium bound form of PulG, major pseudopilin from Klebsiella oxytoca T2SS== | | ==NMR structure of the calcium bound form of PulG, major pseudopilin from Klebsiella oxytoca T2SS== |
- | <StructureSection load='5o2y' size='340' side='right'caption='[[5o2y]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''> | + | <StructureSection load='5o2y' size='340' side='right'caption='[[5o2y]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5o2y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_oxytocus_perniciosus"_flugge_1886 "bacillus oxytocus perniciosus" flugge 1886]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O2Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O2Y FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5o2y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_oxytoca Klebsiella oxytoca]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O2Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O2Y FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pulG, AB185_31145, SAMEA2273639_02747 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=571 "Bacillus oxytocus perniciosus" Flugge 1886])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o2y OCA], [http://pdbe.org/5o2y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o2y RCSB], [http://www.ebi.ac.uk/pdbsum/5o2y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o2y ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o2y OCA], [https://pdbe.org/5o2y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o2y RCSB], [https://www.ebi.ac.uk/pdbsum/5o2y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o2y ProSAT]</span></td></tr> |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| </div> | | </div> |
| <div class="pdbe-citations 5o2y" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 5o2y" style="background-color:#fffaf0;"></div> |
| + | |
| + | ==See Also== |
| + | *[[Pseudopilin|Pseudopilin]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bacillus oxytocus perniciosus flugge 1886]] | + | [[Category: Klebsiella oxytoca]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Bardiaux, B]] | + | [[Category: Bardiaux B]] |
- | [[Category: Egelman, E H]] | + | [[Category: Egelman EH]] |
- | [[Category: Francetic, O]] | + | [[Category: Francetic O]] |
- | [[Category: Izadi-Pruneyre, N]] | + | [[Category: Izadi-Pruneyre N]] |
- | [[Category: Lopez-Castilla, A]] | + | [[Category: Lopez-Castilla A]] |
- | [[Category: Nilges, M]] | + | [[Category: Nilges M]] |
- | [[Category: Thomassin, J L]] | + | [[Category: Thomassin J-L]] |
- | [[Category: Vitorge, B]] | + | [[Category: Vitorge B]] |
- | [[Category: Yu, X]] | + | [[Category: Yu X]] |
- | [[Category: Zheng, W]] | + | [[Category: Zheng W]] |
- | [[Category: Calcium]]
| + | |
- | [[Category: Klebsiella oxytoca t2ss]]
| + | |
- | [[Category: Major pseudopilin]]
| + | |
- | [[Category: Protein transport]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Many Gram-negative bacteria use type 2 secretion systems (T2SSs) to secrete proteins involved in virulence and adaptation. Transport of folded proteins via T2SS nanomachines requires the assembly of inner membrane-anchored fibres called pseudopili. Although efficient pseudopilus assembly is essential for protein secretion, structure-based functional analyses are required to unravel the mechanistic link between these processes. Here, we report an atomic model for a T2SS pseudopilus from Klebsiella oxytoca, obtained by fitting the NMR structure of its calcium-bound subunit PulG into the ~5-A-resolution cryo-electron microscopy reconstruction of assembled fibres. This structure reveals the comprehensive network of inter-subunit contacts and unexpected features, including a disordered central region of the PulG helical stem, and highly flexible C-terminal residues on the fibre surface. NMR, mutagenesis and functional analyses highlight the key role of calcium in PulG folding and stability. Fibre disassembly in the absence of calcium provides a basis for pseudopilus length control, essential for protein secretion, and supports the Archimedes screw model for the type 2 secretion mechanism.An atomic model for a type 2 secretion system pseudopilus from Klebsiella oxytoca reveals a comprehensive network of inter-subunit contacts while mutational and functional analyses highlight the role of calcium in PulG folding and stability.
Structure of the calcium-dependent type 2 secretion pseudopilus.,Lopez-Castilla A, Thomassin JL, Bardiaux B, Zheng W, Nivaskumar M, Yu X, Nilges M, Egelman EH, Izadi-Pruneyre N, Francetic O Nat Microbiol. 2017 Oct 9. doi: 10.1038/s41564-017-0041-2. PMID:28993624[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Lopez-Castilla A, Thomassin JL, Bardiaux B, Zheng W, Nivaskumar M, Yu X, Nilges M, Egelman EH, Izadi-Pruneyre N, Francetic O. Structure of the calcium-dependent type 2 secretion pseudopilus. Nat Microbiol. 2017 Oct 9. doi: 10.1038/s41564-017-0041-2. PMID:28993624 doi:http://dx.doi.org/10.1038/s41564-017-0041-2
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