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| <StructureSection load='6hs0' size='340' side='right'caption='[[6hs0]], [[Resolution|resolution]] 1.45Å' scene=''> | | <StructureSection load='6hs0' size='340' side='right'caption='[[6hs0]], [[Resolution|resolution]] 1.45Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6hs0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Myctu Myctu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HS0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HS0 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6hs0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HS0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HS0 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GNW:1-[(3-chlorophenyl)methyl]piperazine'>GNW</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rv0078 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83332 MYCTU])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GNW:1-[(3-chlorophenyl)methyl]piperazine'>GNW</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hs0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hs0 OCA], [http://pdbe.org/6hs0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hs0 RCSB], [http://www.ebi.ac.uk/pdbsum/6hs0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hs0 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hs0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hs0 OCA], [https://pdbe.org/6hs0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hs0 RCSB], [https://www.ebi.ac.uk/pdbsum/6hs0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hs0 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/O53623_MYCTU O53623_MYCTU] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Myctu]] | + | [[Category: Mycobacterium tuberculosis H37Rv]] |
- | [[Category: Tanina, A]] | + | [[Category: Tanina A]] |
- | [[Category: Wintjens, R]] | + | [[Category: Wintjens R]] |
- | [[Category: Wohlkonig, A]] | + | [[Category: Wohlkonig A]] |
- | [[Category: Complex]]
| + | |
- | [[Category: Dna binding protein]]
| + | |
- | [[Category: Drug design]]
| + | |
- | [[Category: Ethionamide]]
| + | |
- | [[Category: Helix-turn-helix]]
| + | |
- | [[Category: Inhibitor]]
| + | |
- | [[Category: Tetr-family]]
| + | |
- | [[Category: Tuberculosis]]
| + | |
| Structural highlights
Function
O53623_MYCTU
Publication Abstract from PubMed
Tuberculosis (TB) caused by the pathogen Mycobacterium tuberculosis, represents one of the most challenging threat to public health worldwide, and with the increasing resistance to approved TB drugs, it is needed to develop new strategies to address this issue. Ethionamide is one of the most widely used drugs for the treatment of multidrug-resistant TB. It is a prodrug that requires activation by mycobacterial monooxygenases to inhibit the enoyl-ACP reductase InhA, which is involved in mycolic acid biosynthesis. Very recently, we identified that inhibition of a transcriptional repressor, termed EthR2, derepresses a new bioactivation pathway that results in the boosting of ethionamide activation. Herein, we describe the identification of potent EthR2 inhibitors using fragment-based screening and structure-based optimization. A target-based screening of a fragment library using thermal shift assay followed by X-ray crystallography identified 5 hits. Rapid optimization of the tropinone chemical series led to compounds with improved in vitro potency.
A fragment-based approach towards the discovery of N-substituted tropinones as inhibitors of Mycobacterium tuberculosis transcriptional regulator EthR2.,Prevet H, Moune M, Tanina A, Kemmer C, Herledan A, Frita R, Wohlkonig A, Bourotte M, Villemagne B, Leroux F, Gitzinger M, Baulard AR, Deprez B, Wintjens R, Willand N, Flipo M Eur J Med Chem. 2019 Feb 10;167:426-438. doi: 10.1016/j.ejmech.2019.02.023. PMID:30784877[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Prevet H, Moune M, Tanina A, Kemmer C, Herledan A, Frita R, Wohlkonig A, Bourotte M, Villemagne B, Leroux F, Gitzinger M, Baulard AR, Deprez B, Wintjens R, Willand N, Flipo M. A fragment-based approach towards the discovery of N-substituted tropinones as inhibitors of Mycobacterium tuberculosis transcriptional regulator EthR2. Eur J Med Chem. 2019 Feb 10;167:426-438. doi: 10.1016/j.ejmech.2019.02.023. PMID:30784877 doi:http://dx.doi.org/10.1016/j.ejmech.2019.02.023
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