This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4upf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:22, 9 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Assembly principles of the unique cage formed by the ATPase RavA hexamer and the lysine decarboxylase LdcI decamer==
==Assembly principles of the unique cage formed by the ATPase RavA hexamer and the lysine decarboxylase LdcI decamer==
-
<StructureSection load='4upf' size='340' side='right'caption='[[4upf]], [[Resolution|resolution]] 7.50&Aring;' scene=''>
+
<SX load='4upf' size='340' side='right' viewer='molstar' caption='[[4upf]], [[Resolution|resolution]] 7.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4upf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_mg1655 Escherichia coli mg1655]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UPF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UPF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4upf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_str._K-12_substr._MG1655 Escherichia coli str. K-12 substr. MG1655]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UPF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UPF FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4upb|4upb]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 7.5&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine_decarboxylase Lysine decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.18 4.1.1.18] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4upf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4upf OCA], [https://pdbe.org/4upf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4upf RCSB], [https://www.ebi.ac.uk/pdbsum/4upf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4upf ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4upf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4upf OCA], [http://pdbe.org/4upf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4upf RCSB], [http://www.ebi.ac.uk/pdbsum/4upf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4upf ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LDCI_ECOLI LDCI_ECOLI]] Plays a role in pH homeostasis by consuming protons and neutralizing the acidic by-products of carbohydrate fermentation. [[http://www.uniprot.org/uniprot/RAVA_ECOLI RAVA_ECOLI]] Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone.[HAMAP-Rule:MF_01625]
+
[https://www.uniprot.org/uniprot/LDCI_ECOLI LDCI_ECOLI] Plays a role in pH homeostasis by consuming protons and neutralizing the acidic by-products of carbohydrate fermentation.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 24:
<references/>
<references/>
__TOC__
__TOC__
-
</StructureSection>
+
</SX>
-
[[Category: Escherichia coli mg1655]]
+
[[Category: Escherichia coli str. K-12 substr. MG1655]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lysine decarboxylase]]
+
[[Category: Bacia M]]
-
[[Category: Bacia, M]]
+
[[Category: Chan SWS]]
-
[[Category: Bakkouri, M El]]
+
[[Category: Effantin G]]
-
[[Category: Chan, S W.S]]
+
[[Category: El Bakkouri M]]
-
[[Category: Effantin, G]]
+
[[Category: Gutsche I]]
-
[[Category: Gutsche, I]]
+
[[Category: Houry WA]]
-
[[Category: Houry, W A]]
+
[[Category: Liu K]]
-
[[Category: Liu, K]]
+
[[Category: Malet H]]
-
[[Category: Malet, H]]
+
-
[[Category: Aaa+ atpase]]
+
-
[[Category: Acid stress response]]
+
-
[[Category: Lyase-hydrolase complex]]
+

Current revision

Assembly principles of the unique cage formed by the ATPase RavA hexamer and the lysine decarboxylase LdcI decamer

4upf, resolution 7.50Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4upf"
Personal tools