This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4uc0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:50, 28 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4uc0' size='340' side='right'caption='[[4uc0]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='4uc0' size='340' side='right'caption='[[4uc0]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4uc0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrvi Agrvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UC0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UC0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4uc0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_vitis Agrobacterium vitis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UC0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UC0 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HPA:HYPOXANTHINE'>HPA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HPA:HYPOXANTHINE'>HPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Avi_0263 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=373 AGRVI])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4uc0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4uc0 OCA], [https://pdbe.org/4uc0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4uc0 RCSB], [https://www.ebi.ac.uk/pdbsum/4uc0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4uc0 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Purine-nucleoside_phosphorylase Purine-nucleoside phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.1 2.4.2.1] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4uc0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4uc0 OCA], [http://pdbe.org/4uc0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4uc0 RCSB], [http://www.ebi.ac.uk/pdbsum/4uc0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4uc0 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/B9JYS2_AGRVS B9JYS2_AGRVS]] The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.[PIRNR:PIRNR000477]
+
[https://www.uniprot.org/uniprot/B9JYS2_AGRVS B9JYS2_AGRVS] The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.[PIRNR:PIRNR000477]
==See Also==
==See Also==
-
*[[Purine nucleoside phosphorylase|Purine nucleoside phosphorylase]]
+
*[[Purine nucleoside phosphorylase 3D structures|Purine nucleoside phosphorylase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Agrvi]]
+
[[Category: Agrobacterium vitis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Purine-nucleoside phosphorylase]]
+
[[Category: Ahmed M]]
-
[[Category: Ahmed, M]]
+
[[Category: Almo SC]]
-
[[Category: Almo, S C]]
+
[[Category: Attonito J]]
-
[[Category: Attonito, J]]
+
[[Category: Bhosle R]]
-
[[Category: Bhosle, R]]
+
[[Category: Bonanno J]]
-
[[Category: Bonanno, J]]
+
[[Category: Cameron SA]]
-
[[Category: Cameron, S A]]
+
[[Category: Chamala S]]
-
[[Category: Chamala, S]]
+
[[Category: Chowdhury S]]
-
[[Category: Chowdhury, S]]
+
[[Category: Glenn AS]]
-
[[Category: Glenn, A S]]
+
[[Category: Hammonds J]]
-
[[Category: Hammonds, J]]
+
[[Category: Hillerich B]]
-
[[Category: Hillerich, B]]
+
[[Category: Love JD]]
-
[[Category: Love, J D]]
+
[[Category: Ramagopal UA]]
-
[[Category: Structural genomic]]
+
[[Category: Sampathkumar P]]
-
[[Category: Ramagopal, U A]]
+
[[Category: Schramm VL]]
-
[[Category: Sampathkumar, P]]
+
[[Category: Seidel R]]
-
[[Category: Schramm, V L]]
+
[[Category: Stead M]]
-
[[Category: Seidel, R]]
+
[[Category: Toro R]]
-
[[Category: Stead, M]]
+
[[Category: Wasserman SR]]
-
[[Category: Toro, R]]
+
-
[[Category: Wasserman, S R]]
+
-
[[Category: Nysgrc]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure Of a purine nucleoside phosphorylase (PSI-NYSGRC-029736) from Agrobacterium vitis

PDB ID 4uc0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools