6jyv
From Proteopedia
(Difference between revisions)
(One intermediate revision not shown.) | |||
Line 3: | Line 3: | ||
<StructureSection load='6jyv' size='340' side='right'caption='[[6jyv]], [[Resolution|resolution]] 1.65Å' scene=''> | <StructureSection load='6jyv' size='340' side='right'caption='[[6jyv]], [[Resolution|resolution]] 1.65Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[6jyv]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JYV OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6jyv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JYV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6JYV FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.651Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6jyv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jyv OCA], [https://pdbe.org/6jyv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6jyv RCSB], [https://www.ebi.ac.uk/pdbsum/6jyv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6jyv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q9HWJ0_PSEAE Q9HWJ0_PSEAE] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Isopenicillin N synthase (IPNS) is a nonheme-Fe(2+)-dependent enzyme that mediates a key step in penicillin biosynthesis. It catalyses the conversion of the tripeptide delta-(l-alpha-aminoadipoyl)-l-cysteine-d-valine (ACV) to isopenicillin N, which is a key precursor to beta-lactam antibiotics. The pa4191 gene in Pseudomonas aeruginosa PAO1 has provisionally been annotated as a member of the IPNS family. In this work, we report the crystal structure of PA4191 from P. aeruginosa (PaIPNS hereafter). The 1.65A resolution PaIPNS structure forms a jelly roll fold and is confirmed to be a member of the IPNS family based on structural homology. A metal centre within the jelly roll consists of the strictly conserved His201, Asp203 and His257 residues. MicroScale Thermophoresis binding analysis confirms that PaIPNS is a metal-binding protein with a strong preference for iron, but that it does not bind the tripeptide ACV. Structural comparison of PaIPNS with a previously reported IPNS-ACV complex structure reveals a restricted binding pocket that is unable to accommodate ACV. | ||
+ | |||
+ | Structural characterization of an isopenicillin N synthase family oxygenase from Pseudomonas aeruginosa PAO1.,Zhang H, Che S, Wang R, Liu R, Zhang Q, Bartlam M Biochem Biophys Res Commun. 2019 May 13. pii: S0006-291X(19)30932-5. doi:, 10.1016/j.bbrc.2019.05.062. PMID:31097228<ref>PMID:31097228</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6jyv" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Bartlam | + | [[Category: Pseudomonas aeruginosa PAO1]] |
- | [[Category: Che | + | [[Category: Bartlam M]] |
- | [[Category: Hao | + | [[Category: Che S]] |
- | [[Category: Liu | + | [[Category: Hao Z]] |
- | [[Category: Wang | + | [[Category: Liu R]] |
- | [[Category: Zhang | + | [[Category: Wang R]] |
- | + | [[Category: Zhang Q]] | |
- | + | ||
- | + | ||
- | + |
Current revision
Structure of an isopenicillin N synthase from Pseudomonas aeruginosa PAO1
|
Categories: Large Structures | Pseudomonas aeruginosa PAO1 | Bartlam M | Che S | Hao Z | Liu R | Wang R | Zhang Q