6k4c
From Proteopedia
(Difference between revisions)
m (Protected "6k4c" [edit=sysop:move=sysop]) |
|||
(4 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Ancestral luciferase AncLamp in complex with DLSA== | |
+ | <StructureSection load='6k4c' size='340' side='right'caption='[[6k4c]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6k4c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lampyridae Lampyridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6K4C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6K4C FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SLU:5-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL]+ADENOSINE'>SLU</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6k4c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6k4c OCA], [https://pdbe.org/6k4c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6k4c RCSB], [https://www.ebi.ac.uk/pdbsum/6k4c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6k4c ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The color of firefly bioluminescence is determined by the structure of luciferase. Firefly luciferase genes have been isolated from more than 30 species, producing light ranging in color from green to orange-yellow. Here, we reconstructed seven ancestral firefly luciferase genes, characterized the enzymatic properties of the recombinant proteins, and determined the crystal structures of the gene from ancestral Lampyridae. Results showed that the synthetic luciferase for the last common firefly ancestor exhibited green light caused by a spatial constraint on the luciferin molecule in enzyme, while fatty acyl-CoA synthetic activity, an original function of firefly luciferase, was diminished in exchange. All known firefly species are bioluminescent in the larvae, with a common ancestor arising approximately 100 million years ago. Combined, our findings propose that, within the mid-Cretaceous forest, the common ancestor of fireflies evolved green light luciferase via trade-off of the original function, which was likely aposematic warning display against nocturnal predation. | ||
- | + | Resurrecting the ancient glow of the fireflies.,Oba Y, Konishi K, Yano D, Shibata H, Kato D, Shirai T Sci Adv. 2020 Dec 2;6(49). pii: 6/49/eabc5705. doi: 10.1126/sciadv.abc5705. Print, 2020 Dec. PMID:33268373<ref>PMID:33268373</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 6k4c" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | |
- | [[Category: | + | ==See Also== |
- | [[Category: | + | *[[Luciferase 3D structures|Luciferase 3D structures]] |
- | [[Category: | + | == References == |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Lampyridae]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Kato D]] | ||
+ | [[Category: Konishi K]] | ||
+ | [[Category: Oba Y]] | ||
+ | [[Category: Shirai T]] | ||
+ | [[Category: Yano D]] |
Current revision
Ancestral luciferase AncLamp in complex with DLSA
|
Categories: Lampyridae | Large Structures | Kato D | Konishi K | Oba Y | Shirai T | Yano D