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| | ==SOLUTION STRUCTURE OF MIAMP1, A PLANT ANTIMICROBIAL PROTEIN== | | ==SOLUTION STRUCTURE OF MIAMP1, A PLANT ANTIMICROBIAL PROTEIN== |
| - | <StructureSection load='1c01' size='340' side='right'caption='[[1c01]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='1c01' size='340' side='right'caption='[[1c01]]' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[1c01]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Macadamia_integrifolia Macadamia integrifolia]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C01 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C01 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1c01]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Macadamia_integrifolia Macadamia integrifolia]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C01 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C01 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c01 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c01 OCA], [http://pdbe.org/1c01 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1c01 RCSB], [http://www.ebi.ac.uk/pdbsum/1c01 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1c01 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr> |
| | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c01 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c01 OCA], [https://pdbe.org/1c01 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c01 RCSB], [https://www.ebi.ac.uk/pdbsum/1c01 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c01 ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/AMP1_MACIN AMP1_MACIN]] Antimicrobial peptide which inhibits the growth of a variety of fungi, oomycetes, Gram-positive bacterial phytopatogenes and S.cerevisiae in vitro. No activity against E.coli. | + | [https://www.uniprot.org/uniprot/AMP1_MACIN AMP1_MACIN] Antimicrobial peptide which inhibits the growth of a variety of fungi, oomycetes, Gram-positive bacterial phytopatogenes and S.cerevisiae in vitro. No activity against E.coli. |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| | [[Category: Macadamia integrifolia]] | | [[Category: Macadamia integrifolia]] |
| - | [[Category: Craik, D J]] | + | [[Category: Craik DJ]] |
| - | [[Category: Green, J L]] | + | [[Category: Green JL]] |
| - | [[Category: Harrison, S J]] | + | [[Category: Harrison SJ]] |
| - | [[Category: Manners, J M]] | + | [[Category: Manners JM]] |
| - | [[Category: Marcus, J P]] | + | [[Category: Marcus JP]] |
| - | [[Category: McManus, A M]] | + | [[Category: McManus AM]] |
| - | [[Category: Nielsen, K J]] | + | [[Category: Nielsen KJ]] |
| - | [[Category: Antimicrobial protein]]
| + | |
| - | [[Category: Beta-barrel]]
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| - | [[Category: Greek key]]
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| Structural highlights
Function
AMP1_MACIN Antimicrobial peptide which inhibits the growth of a variety of fungi, oomycetes, Gram-positive bacterial phytopatogenes and S.cerevisiae in vitro. No activity against E.coli.
Publication Abstract from PubMed
MiAMP1 is a recently discovered 76 amino acid residue, highly basic protein from the nut kernel of Macadamia integrifolia which possesses no sequence homology to any known protein and inhibits the growth of several microbial plant pathogens in vitro while having no effect on mammalian or plant cells. It is considered to be a potentially useful tool for the genetic engineering of disease resistance in transgenic crop plants and for the design of new fungicides.The three-dimensional structure of MiAMP1 was determined through homonuclear and heteronuclear ((15)N) 2D NMR spectroscopy and subsequent simulated annealing calculations with the ultimate aim of understanding the structure-activity relationships of the protein. MiAMP1 is made up of eight beta-strands which are arranged in two Greek key motifs. These Greek key motifs associate to form a Greek key beta-barrel.This structure is unique amongst plant antimicrobial proteins and forms a new class which we term the beta-barrelins. Interestingly, the structure of MiAMP1 bears remarkable similarity to a yeast killer toxin from Williopsis mrakii. This toxin acts by inhibiting beta-glucan synthesis and thereby cell wall construction in sensitive strains of yeast. The structural similarity of MiAMP1 and WmKT, which originate from plant and fungal phyla respectively, may reflect a similar mode of action.
MiAMP1, a novel protein from Macadamia integrifolia adopts a Greek key beta-barrel fold unique amongst plant antimicrobial proteins.,McManus AM, Nielsen KJ, Marcus JP, Harrison SJ, Green JL, Manners JM, Craik DJ J Mol Biol. 1999 Oct 29;293(3):629-38. PMID:10543955[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ McManus AM, Nielsen KJ, Marcus JP, Harrison SJ, Green JL, Manners JM, Craik DJ. MiAMP1, a novel protein from Macadamia integrifolia adopts a Greek key beta-barrel fold unique amongst plant antimicrobial proteins. J Mol Biol. 1999 Oct 29;293(3):629-38. PMID:10543955 doi:10.1006/jmbi.1999.3163
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