4ymy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:37, 8 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4ymy' size='340' side='right'caption='[[4ymy]], [[Resolution|resolution]] 1.00&Aring;' scene=''>
<StructureSection load='4ymy' size='340' side='right'caption='[[4ymy]], [[Resolution|resolution]] 1.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ymy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YMY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YMY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ymy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YMY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YMY FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At1g79260, YUP8H12R.14 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ymy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ymy OCA], [http://pdbe.org/4ymy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ymy RCSB], [http://www.ebi.ac.uk/pdbsum/4ymy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ymy ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ymy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ymy OCA], [https://pdbe.org/4ymy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ymy RCSB], [https://www.ebi.ac.uk/pdbsum/4ymy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ymy ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Y1926_ARATH Y1926_ARATH]] May play a role in the intracellular transport of hydrophobic ligands (Potential).
+
[https://www.uniprot.org/uniprot/NB_ARATH NB_ARATH] Heme-binding protein able to scavenge peroxynitrite and to protect free L-tyrosine against peroxynitrite-mediated nitration, by acting as a peroxynitrite isomerase that converts peroxynitrite to nitrate. Therefore, this protein likely plays a role in peroxynitrite sensing and in the detoxification of reactive nitrogen and oxygen species (RNS and ROS, respectively) (PubMed:32295384). Is able to bind nitric oxide (NO) in vitro, but may act as a sensor of peroxynitrite levels in vivo (PubMed:32295384, PubMed:19938152).<ref>PMID:19938152</ref> <ref>PMID:32295384</ref>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arath]]
+
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Hayashi, T]]
+
[[Category: Hayashi T]]
-
[[Category: Himiyama, T]]
+
[[Category: Himiyama T]]
-
[[Category: Mizohata, E]]
+
[[Category: Mizohata E]]
-
[[Category: Onoda, A]]
+
[[Category: Onoda A]]
-
[[Category: Oohora, K]]
+
[[Category: Oohora K]]
-
[[Category: Tachikawa, K]]
+
[[Category: Tachikawa K]]
-
[[Category: Beta-barrel]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Hydrophobic ligand]]
+
-
[[Category: Intracellular transport]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal structure of mutant nitrobindin M75A/H76L/Q96C/M148L/H158A (NB11) from Arabidopsis thaliana

PDB ID 4ymy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools