6mk8

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==NMR structure of Database designed and improved anti-Staphylococcal peptide DFT503 bound to micelles==
==NMR structure of Database designed and improved anti-Staphylococcal peptide DFT503 bound to micelles==
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<StructureSection load='6mk8' size='340' side='right'caption='[[6mk8]], [[NMR_Ensembles_of_Models | 5 NMR models]]' scene=''>
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<StructureSection load='6mk8' size='340' side='right'caption='[[6mk8]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6mk8]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MK8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MK8 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6mk8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MK8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MK8 FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 5 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6mk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mk8 OCA], [http://pdbe.org/6mk8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mk8 RCSB], [http://www.ebi.ac.uk/pdbsum/6mk8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mk8 ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mk8 OCA], [https://pdbe.org/6mk8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mk8 RCSB], [https://www.ebi.ac.uk/pdbsum/6mk8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mk8 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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As bacterial resistance to traditional antibiotics continues to emerge, new alternatives are urgently needed. Antimicrobial peptides (AMPs) are important candidates. However, how AMPs are designed with in vivo efficacy is poorly understood. Our study was designed to understand structural moieties of cationic peptides that would lead to their successful use as antibacterial agents. In contrast to the common perception, serum binding and peptide stability were not the major reasons for in vivo failure in our studies. Rather, our systematic study of a series of peptides with varying lysines revealed the significance of low cationicity for systemic in vivo efficacy against Gram-positive pathogens. We propose that peptides with biased amino acid compositions are not favored to associate with multiple host factors and are more likely to show in vivo efficacy. Thus, our results uncover a useful design strategy for developing potent peptides against multidrug-resistant pathogens.
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Low cationicity is important for systemic in vivo efficacy of database-derived peptides against drug-resistant Gram-positive pathogens.,Mishra B, Lakshmaiah Narayana J, Lushnikova T, Wang X, Wang G Proc Natl Acad Sci U S A. 2019 Jun 17. pii: 1821410116. doi:, 10.1073/pnas.1821410116. PMID:31209048<ref>PMID:31209048</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6mk8" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Wang, G]]
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[[Category: Synthetic construct]]
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[[Category: Amphipathic helix]]
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[[Category: Wang G]]
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[[Category: Antimicrobial peptide]]
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[[Category: Antimicrobial protein]]
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[[Category: Database designed peptide]]
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[[Category: Leucine-rich peptide]]
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Current revision

NMR structure of Database designed and improved anti-Staphylococcal peptide DFT503 bound to micelles

PDB ID 6mk8

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