6p6f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:16, 30 October 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==BG505 SOSIP-I53-50NP==
==BG505 SOSIP-I53-50NP==
-
<StructureSection load='6p6f' size='340' side='right'caption='[[6p6f]], [[Resolution|resolution]] 4.50&Aring;' scene=''>
+
<SX load='6p6f' size='340' side='right' viewer='molstar' caption='[[6p6f]], [[Resolution|resolution]] 4.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6p6f]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P6F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6P6F FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6p6f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P6F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6P6F FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6p6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p6f OCA], [http://pdbe.org/6p6f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6p6f RCSB], [http://www.ebi.ac.uk/pdbsum/6p6f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6p6f ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.5&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6p6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p6f OCA], [https://pdbe.org/6p6f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6p6f RCSB], [https://www.ebi.ac.uk/pdbsum/6p6f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6p6f ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q2N0S6_9HIV1 Q2N0S6_9HIV1] The envelope glyprotein gp160 precursor down-modulates cell surface CD4 antigen by interacting with it in the endoplasmic reticulum and blocking its transport to the cell surface (By similarity).[RuleBase:RU004292][SAAS:SAAS000328_004_020447] The gp120-gp41 heterodimer allows rapid transcytosis of the virus through CD4 negative cells such as simple epithelial monolayers of the intestinal, rectal and endocervical epithelial barriers. Both gp120 and gp41 specifically recognize glycosphingolipids galactosyl-ceramide (GalCer) or 3' sulfo-galactosyl-ceramide (GalS) present in the lipid rafts structures of epithelial cells. Binding to these alternative receptors allows the rapid transcytosis of the virus through the epithelial cells. This transcytotic vesicle-mediated transport of virions from the apical side to the basolateral side of the epithelial cells does not involve infection of the cells themselves (By similarity).[SAAS:SAAS000328_004_240990]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The development of native-like HIV-1 envelope (Env) trimer antigens has enabled the induction of neutralizing antibody (NAb) responses against neutralization-resistant HIV-1 strains in animal models. However, NAb responses are relatively weak and narrow in specificity. Displaying antigens in a multivalent fashion on nanoparticles (NPs) is an established strategy to increase their immunogenicity. Here we present the design and characterization of two-component protein NPs displaying 20 stabilized SOSIP trimers from various HIV-1 strains. The two-component nature permits the incorporation of exclusively well-folded, native-like Env trimers into NPs that self-assemble in vitro with high efficiency. Immunization studies show that the NPs are particularly efficacious as priming immunogens, improve the quality of the Ab response over a conventional one-component nanoparticle system, and are most effective when SOSIP trimers with an apex-proximate neutralizing epitope are displayed. Their ability to enhance and shape the immunogenicity of SOSIP trimers make these NPs a promising immunogen platform.
 +
 +
Enhancing and shaping the immunogenicity of native-like HIV-1 envelope trimers with a two-component protein nanoparticle.,Brouwer PJM, Antanasijevic A, Berndsen Z, Yasmeen A, Fiala B, Bijl TPL, Bontjer I, Bale JB, Sheffler W, Allen JD, Schorcht A, Burger JA, Camacho M, Ellis D, Cottrell CA, Behrens AJ, Catalano M, Del Moral-Sanchez I, Ketas TJ, LaBranche C, van Gils MJ, Sliepen K, Stewart LJ, Crispin M, Montefiori DC, Baker D, Moore JP, Klasse PJ, Ward AB, King NP, Sanders RW Nat Commun. 2019 Sep 19;10(1):4272. doi: 10.1038/s41467-019-12080-1. PMID:31537780<ref>PMID:31537780</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6p6f" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
-
</StructureSection>
+
</SX>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Berndsen, Z T]]
+
[[Category: Synthetic construct]]
-
[[Category: Ward, A B]]
+
[[Category: Berndsen ZT]]
-
[[Category: Allergen]]
+
[[Category: Ward AB]]
-
[[Category: Hiv]]
+
-
[[Category: Immunogen]]
+
-
[[Category: Nanoparticle]]
+
-
[[Category: Self-assembling]]
+
-
[[Category: Sosip]]
+

Current revision

BG505 SOSIP-I53-50NP

6p6f, resolution 4.50Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools