This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4z4t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:58, 10 January 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4z4t' size='340' side='right'caption='[[4z4t]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='4z4t' size='340' side='right'caption='[[4z4t]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4z4t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Norwalk_calicivirus Norwalk calicivirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z4T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Z4T FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4z4t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norwalk_virus Norwalk virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z4T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Z4T FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4z4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z4t OCA], [http://pdbe.org/4z4t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4z4t RCSB], [http://www.ebi.ac.uk/pdbsum/4z4t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4z4t ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4z4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z4t OCA], [https://pdbe.org/4z4t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4z4t RCSB], [https://www.ebi.ac.uk/pdbsum/4z4t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4z4t ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5F4T5_9CALI Q5F4T5_9CALI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 19:
</div>
</div>
<div class="pdbe-citations 4z4t" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4z4t" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 21: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Norwalk calicivirus]]
+
[[Category: Norwalk virus]]
-
[[Category: Hansman, G S]]
+
[[Category: Hansman GS]]
-
[[Category: Koromyslova, A D]]
+
[[Category: Koromyslova AD]]
-
[[Category: Leuthold, M M]]
+
[[Category: Leuthold MM]]
-
[[Category: Fucose]]
+
-
[[Category: Norovirus]]
+
-
[[Category: Protruding domain]]
+
-
[[Category: Viral protein]]
+

Current revision

Crystal structure of GII.10 P domain in complex with 75mM fucose

PDB ID 4z4t

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools