We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

3cq9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px <!-- The line below this paragraph, containing "STRUCTURE_3cq9", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...)
Current revision (01:41, 21 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3cq9.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the lp_1622 protein from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR114==
-
The line below this paragraph, containing "STRUCTURE_3cq9", creates the "Structure Box" on the page.
+
<StructureSection load='3cq9' size='340' side='right'caption='[[3cq9]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cq9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum_WCFS1 Lactiplantibacillus plantarum WCFS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CQ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CQ9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3cq9| PDB=3cq9 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cq9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cq9 OCA], [https://pdbe.org/3cq9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cq9 RCSB], [https://www.ebi.ac.uk/pdbsum/3cq9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cq9 ProSAT], [https://www.topsan.org/Proteins/NESGC/3cq9 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of the lp_1622 protein from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR114'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
3CQ9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum_wcfs1 Lactobacillus plantarum wcfs1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CQ9 OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cq/3cq9_consurf.spt"</scriptWhenChecked>
-
[[Category: Lactobacillus plantarum wcfs1]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Abashidze, M.]]
+
</jmolCheckbox>
-
[[Category: Acton, T B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cq9 ConSurf].
-
[[Category: Ciccosanti, C.]]
+
<div style="clear:both"></div>
-
[[Category: Foote, E L.]]
+
__TOC__
-
[[Category: Hunt, J F.]]
+
</StructureSection>
-
[[Category: Janjua, H.]]
+
[[Category: Lactiplantibacillus plantarum WCFS1]]
-
[[Category: Maglaqui, M.]]
+
[[Category: Large Structures]]
-
[[Category: Montelione, G T.]]
+
[[Category: Abashidze M]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Acton TB]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Tong, L.]]
+
[[Category: Foote EL]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Hunt JF]]
-
[[Category: Xiao, R.]]
+
[[Category: Janjua H]]
-
[[Category: Zhao, L.]]
+
[[Category: Maglaqui M]]
-
[[Category: Lpr114]]
+
[[Category: Montelione GT]]
-
[[Category: Nesg]]
+
[[Category: Seetharaman J]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Tong L]]
-
[[Category: Protein structure initiative]]
+
[[Category: Vorobiev SM]]
-
[[Category: Psi-2]]
+
[[Category: Xiao R]]
-
[[Category: Q88wk7_lacpl]]
+
[[Category: Zhao L]]
-
[[Category: Structural genomic]]
+
-
[[Category: Thiamine pyrophosphokinase]]
+
-
[[Category: Transferase]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 16 23:17:22 2008''
+

Current revision

Crystal structure of the lp_1622 protein from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR114

PDB ID 3cq9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3cq9"
Personal tools