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| | <StructureSection load='5wls' size='340' side='right'caption='[[5wls]], [[Resolution|resolution]] 2.50Å' scene=''> | | <StructureSection load='5wls' size='340' side='right'caption='[[5wls]], [[Resolution|resolution]] 2.50Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[5wls]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WLS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5WLS FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5wls]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WLS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WLS FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.496Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRK3, At3g42880, F18P9.40 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5wls FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wls OCA], [https://pdbe.org/5wls PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5wls RCSB], [https://www.ebi.ac.uk/pdbsum/5wls PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5wls ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5wls FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wls OCA], [http://pdbe.org/5wls PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wls RCSB], [http://www.ebi.ac.uk/pdbsum/5wls PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wls ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/PRK3_ARATH PRK3_ARATH]] Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth (PubMed:23024212). Can phosphorylate ROPGEF1 in vitro (PubMed:23024212).<ref>PMID:23024212</ref> | + | [https://www.uniprot.org/uniprot/PRK3_ARATH PRK3_ARATH] Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth (PubMed:23024212). Can phosphorylate ROPGEF1 in vitro (PubMed:23024212).<ref>PMID:23024212</ref> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Arath]] | + | [[Category: Arabidopsis thaliana]] |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Non-specific serine/threonine protein kinase]]
| + | [[Category: Chakraborty S]] |
| - | [[Category: Chakraborty, S]] | + | [[Category: Pan H]] |
| - | [[Category: Pan, H]] | + | [[Category: Xu G]] |
| - | [[Category: Xu, G]] | + | |
| - | [[Category: Extracellular domain]]
| + | |
| - | [[Category: Leucine rich repeat]]
| + | |
| - | [[Category: Plant protein]]
| + | |
| - | [[Category: Pollen receptor kinase]]
| + | |
| - | [[Category: Receptor like kinase]]
| + | |
| Structural highlights
Function
PRK3_ARATH Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth (PubMed:23024212). Can phosphorylate ROPGEF1 in vitro (PubMed:23024212).[1]
Publication Abstract from PubMed
During reproduction in flowering plants, the male gametophyte delivers an immotile male gamete to the female gametophyte in the pistil by formation of pollen tubes. In Arabidopsis thaliana, two synergid cells situated on either side of the egg cell produce cysteine-rich chemoattractant peptide LURE that guides the pollen tube to the female gametophyte for sexual reproduction. Recently, in Arabidopsis thaliana, Pollen Receptor Kinase 3 (PRK3), along with PRK1, PRK6, and PRK8, have been predicted to be the receptors responsible for sensing LURE. These receptors belong to the Leucine Rich Repeat Receptor Like Kinases (LRR-RLKs), the largest family of receptor kinases found in Arabidopsis thaliana. How PRKs regulate the growth and development of the pollen tube remains elusive. In order to better understand the PRK-mediated signaling mechanism in pollen tube growth and guidance, we have determined the crystal structure of the extracellular domain (ecd) of PRK3 at 2.5 A, which resembles the SERK family of plant co-receptors. The structure of ecdPRK3 is composed of a conserved surface that coincides with the conserved receptor-binding surface of the SERK family of co-receptors. Our structural analyses of PRK3 have provided a template for future functional studies of the PRK family of LRR-RLK receptors in the regulation of pollen tube development.
The Extracellular Domain of Pollen Receptor Kinase 3 is structurally similar to the SERK family of co-receptors.,Chakraborty S, Pan H, Tang Q, Woolard C, Xu G Sci Rep. 2018 Feb 12;8(1):2796. doi: 10.1038/s41598-018-21218-y. PMID:29434276[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Chang F, Gu Y, Ma H, Yang Z. AtPRK2 promotes ROP1 activation via RopGEFs in the control of polarized pollen tube growth. Mol Plant. 2013 Jul;6(4):1187-201. doi: 10.1093/mp/sss103. Epub 2012 Sep 30. PMID:23024212 doi:http://dx.doi.org/10.1093/mp/sss103
- ↑ Chakraborty S, Pan H, Tang Q, Woolard C, Xu G. The Extracellular Domain of Pollen Receptor Kinase 3 is structurally similar to the SERK family of co-receptors. Sci Rep. 2018 Feb 12;8(1):2796. doi: 10.1038/s41598-018-21218-y. PMID:29434276 doi:http://dx.doi.org/10.1038/s41598-018-21218-y
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