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5ag8

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<StructureSection load='5ag8' size='340' side='right'caption='[[5ag8]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='5ag8' size='340' side='right'caption='[[5ag8]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5ag8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AG8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AG8 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5ag8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AG8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AG8 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ag9|5ag9]], [[5agb|5agb]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Gingipain_R Gingipain R], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.37 3.4.22.37] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ag8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ag8 OCA], [https://pdbe.org/5ag8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ag8 RCSB], [https://www.ebi.ac.uk/pdbsum/5ag8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ag8 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ag8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ag8 OCA], [http://pdbe.org/5ag8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ag8 RCSB], [http://www.ebi.ac.uk/pdbsum/5ag8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ag8 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/CPG2_PORGI CPG2_PORGI]] Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Its proteolytic activity is a major factor in both periodontal tissue destruction and in bacterial host defense mechanisms. Activates complement C3 and C5 (By similarity).
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[https://www.uniprot.org/uniprot/CPG2_PORGI CPG2_PORGI] Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Its proteolytic activity is a major factor in both periodontal tissue destruction and in bacterial host defense mechanisms. Activates complement C3 and C5 (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Gingipain R]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Porphyromonas gingivalis]]
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[[Category: Porphyromonas gingivalis W83]]
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[[Category: Diego, I de]]
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[[Category: Dubin G]]
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[[Category: Dubin, G]]
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[[Category: Enghild J]]
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[[Category: Enghild, J]]
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[[Category: Golik P]]
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[[Category: Golik, P]]
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[[Category: Gomis-Ruth FX]]
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[[Category: Gomis-Ruth, F X]]
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[[Category: Koneru L]]
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[[Category: Koneru, L]]
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[[Category: Ksiazek M]]
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[[Category: Ksiazek, M]]
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[[Category: Mizgalska D]]
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[[Category: Mizgalska, D]]
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[[Category: Nguyen KA]]
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[[Category: Nguyen, K A]]
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[[Category: Nowak M]]
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[[Category: Nowak, M]]
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[[Category: Nowakowska Z]]
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[[Category: Nowakowska, Z]]
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[[Category: Potempa B]]
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[[Category: Potempa, B]]
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[[Category: Potempa J]]
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[[Category: Potempa, J]]
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[[Category: Szmigielski B]]
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[[Category: Szmigielski, B]]
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[[Category: Thogersen IB]]
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[[Category: Thogersen, I B]]
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[[Category: De Diego I]]
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[[Category: Hydrolase]]
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[[Category: Type ix secretion system]]
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Current revision

CRYSTAL STRUCTURE OF A MUTANT (665I6H) OF THE C-TERMINAL DOMAIN OF RGPB

PDB ID 5ag8

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