This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5aoy
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 3: | Line 3: | ||
<StructureSection load='5aoy' size='340' side='right'caption='[[5aoy]], [[Resolution|resolution]] 1.75Å' scene=''> | <StructureSection load='5aoy' size='340' side='right'caption='[[5aoy]], [[Resolution|resolution]] 1.75Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5aoy]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5aoy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AOY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AOY FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75Å</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5aoy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aoy OCA], [https://pdbe.org/5aoy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5aoy RCSB], [https://www.ebi.ac.uk/pdbsum/5aoy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5aoy ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/ENDOV_MOUSE ENDOV_MOUSE] Endoribonuclease that specifically cleaves inosine-containing RNAs: cleaves RNA at the second phosphodiester bond 3' to inosine. Has strong preference for single-stranded RNAs (ssRNAs) toward double-stranded RNAs (dsRNAs). Cleaves mRNAs and tRNAs containing inosine. Also able to cleave structure-specific dsRNA substrates containing the specific sites 5'-IIUI-3' and 5'-UIUU-3'. Inosine is present in a number of RNAs following editing; the function of inosine-specific endoribonuclease is still unclear: it could either play a regulatory role in edited RNAs, or be involved in antiviral response by removing the hyperedited long viral dsRNA genome that has undergone A-to-I editing. Binds branched DNA structures (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 25: | Line 26: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Mus musculus]] |
| - | [[Category: Alseth | + | [[Category: Alseth I]] |
| - | [[Category: Bjoras | + | [[Category: Bjoras M]] |
| - | [[Category: Dalhus | + | [[Category: Dalhus B]] |
| - | [[Category: Nawaz | + | [[Category: Nawaz MS]] |
| - | [[Category: Ronander | + | [[Category: Ronander ME]] |
| - | [[Category: Solvoll | + | [[Category: Solvoll AM]] |
| - | [[Category: Strom-Andersen | + | [[Category: Strom-Andersen P]] |
| - | [[Category: Vik | + | [[Category: Vik ES]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Structure of mouse Endonuclease V
| |||||||||||
Categories: Large Structures | Mus musculus | Alseth I | Bjoras M | Dalhus B | Nawaz MS | Ronander ME | Solvoll AM | Strom-Andersen P | Vik ES
