This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3mdq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:45, 1 February 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3mdq' size='340' side='right'caption='[[3mdq]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='3mdq' size='340' side='right'caption='[[3mdq]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3mdq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cyth3 Cyth3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MDQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MDQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3mdq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cytophaga_hutchinsonii_ATCC_33406 Cytophaga hutchinsonii ATCC 33406]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MDQ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mdq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mdq OCA], [https://pdbe.org/3mdq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mdq RCSB], [https://www.ebi.ac.uk/pdbsum/3mdq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mdq ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ppx, CHU_0316 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269798 CYTH3])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Exopolyphosphatase Exopolyphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.11 3.6.1.11] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mdq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mdq OCA], [http://pdbe.org/3mdq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mdq RCSB], [http://www.ebi.ac.uk/pdbsum/3mdq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mdq ProSAT]</span></td></tr>
+
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 22: Line 19:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cyth3]]
+
[[Category: Cytophaga hutchinsonii ATCC 33406]]
-
[[Category: Exopolyphosphatase]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
 
-
[[Category: Hydrolase]]
 
-
[[Category: Jcsg]]
 
-
[[Category: PSI, Protein structure initiative]]
 

Current revision

Crystal structure of an Exopolyphosphatase (CHU_0316) from Cytophaga hutchinsonii ATCC 33406 at 1.50 A resolution

PDB ID 3mdq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools