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2pgn

From Proteopedia

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(New page: 200px <!-- The line below this paragraph, containing "STRUCTURE_2pgn", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...)
Current revision (09:09, 21 February 2024) (edit) (undo)
 
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[[Image:2pgn.jpg|left|200px]]
 
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==The crystal structure of FAD and ThDP-dependent Cyclohexane-1,2-dione Hydrolase in Complex with Cyclohexane-1,2-dione==
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The line below this paragraph, containing "STRUCTURE_2pgn", creates the "Structure Box" on the page.
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<StructureSection load='2pgn' size='340' side='right'caption='[[2pgn]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pgn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aromatoleum_diolicum Aromatoleum diolicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PGN FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CXO:CYCLOHEXANE-1,2-DIONE'>CXO</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene></td></tr>
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{{STRUCTURE_2pgn| PDB=2pgn | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pgn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pgn OCA], [https://pdbe.org/2pgn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pgn RCSB], [https://www.ebi.ac.uk/pdbsum/2pgn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pgn ProSAT]</span></td></tr>
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</table>
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'''The crystal structure of FAD and ThDP-dependent Cyclohexane-1,2-dione Hydrolase in Complex with Cyclohexane-1,2-dione'''
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGN OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/2pgn_consurf.spt"</scriptWhenChecked>
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[[Category: Ermler, U.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Fraas, S.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Warkentin, E.]]
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</jmolCheckbox>
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[[Category: Hydrolase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pgn ConSurf].
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[[Category: Three alpha/beta domain]]
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<div style="clear:both"></div>
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 24 09:38:55 2008''
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__TOC__
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</StructureSection>
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[[Category: Aromatoleum diolicum]]
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[[Category: Large Structures]]
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[[Category: Ermler U]]
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[[Category: Fraas S]]
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[[Category: Warkentin E]]

Current revision

The crystal structure of FAD and ThDP-dependent Cyclohexane-1,2-dione Hydrolase in Complex with Cyclohexane-1,2-dione

PDB ID 2pgn

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