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| <StructureSection load='1w0m' size='340' side='right'caption='[[1w0m]], [[Resolution|resolution]] 2.50Å' scene=''> | | <StructureSection load='1w0m' size='340' side='right'caption='[[1w0m]], [[Resolution|resolution]] 2.50Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[1w0m]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35583 Atcc 35583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W0M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1W0M FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1w0m]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoproteus_tenax Thermoproteus tenax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W0M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W0M FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1w0l|1w0l]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Triose-phosphate_isomerase Triose-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.1 5.3.1.1] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w0m OCA], [https://pdbe.org/1w0m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w0m RCSB], [https://www.ebi.ac.uk/pdbsum/1w0m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w0m ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1w0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w0m OCA], [http://pdbe.org/1w0m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1w0m RCSB], [http://www.ebi.ac.uk/pdbsum/1w0m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1w0m ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/TPIS_THETK TPIS_THETK] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| ==See Also== | | ==See Also== |
- | *[[Triose Phosphate Isomerase|Triose Phosphate Isomerase]] | + | *[[Triose phosphate isomerase 3D structures|Triose phosphate isomerase 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Atcc 35583]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Triose-phosphate isomerase]] | + | [[Category: Thermoproteus tenax]] |
- | [[Category: Hensel, R]] | + | [[Category: Hensel R]] |
- | [[Category: Knura, T]] | + | [[Category: Knura T]] |
- | [[Category: Lilie, H]] | + | [[Category: Lilie H]] |
- | [[Category: Lorentzen, E]] | + | [[Category: Lorentzen E]] |
- | [[Category: Pohl, E]] | + | [[Category: Pohl E]] |
- | [[Category: Schramm, A]] | + | [[Category: Schramm A]] |
- | [[Category: Stubbe, K]] | + | [[Category: Stubbe K]] |
- | [[Category: Taylor, G]] | + | [[Category: Taylor G]] |
- | [[Category: Tjaden, B]] | + | [[Category: Tjaden B]] |
- | [[Category: Walden, H]] | + | [[Category: Walden H]] |
- | [[Category: Gluconeogenesis]]
| + | |
- | [[Category: Glycolysis]]
| + | |
- | [[Category: Isomerase]]
| + | |
- | [[Category: Triosephosphate isomerase]]
| + | |
| Structural highlights
Function
TPIS_THETK
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Triosephophate isomerase (TIM) is a dimeric enzyme in eucarya, bacteria and mesophilic archaea. In hyperthermophilic archaea, however, TIM exists as a tetramer composed of monomers that are about 10% shorter than other eucaryal and bacterial TIM monomers. We report here the crystal structure of TIM from Thermoproteus tenax, a hyperthermophilic archaeon that has an optimum growth temperature of 86 degrees C. The structure was determined from both a hexagonal and an orthorhombic crystal form to resolutions of 2.5A and 2.3A, and refined to R-factors of 19.7% and 21.5%, respectively. In both crystal forms, T.tenax TIM exists as a tetramer of the familiar (betaalpha)(8)-barrel. In solution, however, and unlike other hyperthermophilic TIMs, the T.tenax enzyme exhibits an equilibrium between inactive dimers and active tetramers, which is shifted to the tetramer state through a specific interaction with glycerol-1-phosphate dehydrogenase of T.tenax. This observation is interpreted in physiological terms as a need to reduce the build-up of thermolabile metabolic intermediates that would be susceptible to destruction by heat. A detailed structural comparison with TIMs from organisms with growth optima ranging from 15 degrees C to 100 degrees C emphasizes the importance in hyperthermophilic proteins of the specific location of ionic interactions for thermal stability rather than their numbers, and shows a clear correlation between the reduction of heat-labile, surface-exposed Asn and Gln residues with thermoadaptation. The comparison confirms the increase in charged surface-exposed residues at the expense of polar residues.
Structure and function of a regulated archaeal triosephosphate isomerase adapted to high temperature.,Walden H, Taylor GL, Lorentzen E, Pohl E, Lilie H, Schramm A, Knura T, Stubbe K, Tjaden B, Hensel R J Mol Biol. 2004 Sep 17;342(3):861-75. PMID:15342242[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Walden H, Taylor GL, Lorentzen E, Pohl E, Lilie H, Schramm A, Knura T, Stubbe K, Tjaden B, Hensel R. Structure and function of a regulated archaeal triosephosphate isomerase adapted to high temperature. J Mol Biol. 2004 Sep 17;342(3):861-75. PMID:15342242 doi:10.1016/j.jmb.2004.07.067
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