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| <StructureSection load='1lgh' size='340' side='right'caption='[[1lgh]], [[Resolution|resolution]] 2.40Å' scene=''> | | <StructureSection load='1lgh' size='340' side='right'caption='[[1lgh]], [[Resolution|resolution]] 2.40Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[1lgh]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_14031 Atcc 14031]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LGH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LGH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1lgh]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Magnetospirillum_molischianum Magnetospirillum molischianum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LGH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LGH FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=DET:UNDECYLAMINE-N,N-DIMETHYL-N-OXIDE'>DET</scene>, <scene name='pdbligand=HTO:HEPTANE-1,2,3-TRIOL'>HTO</scene>, <scene name='pdbligand=LYC:LYCOPENE'>LYC</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lgh OCA], [http://pdbe.org/1lgh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lgh RCSB], [http://www.ebi.ac.uk/pdbsum/1lgh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1lgh ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DET:UNDECYLAMINE-N,N-DIMETHYL-N-OXIDE'>DET</scene>, <scene name='pdbligand=HTO:HEPTANE-1,2,3-TRIOL'>HTO</scene>, <scene name='pdbligand=LYC:LYCOPENE'>LYC</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lgh OCA], [https://pdbe.org/1lgh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lgh RCSB], [https://www.ebi.ac.uk/pdbsum/1lgh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lgh ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/LHA_RHOMO LHA_RHOMO]] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. [[http://www.uniprot.org/uniprot/LHB1_RHOMO LHB1_RHOMO]] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | + | [https://www.uniprot.org/uniprot/LHB1_MAGML LHB1_MAGML] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| <jmolCheckbox> | | <jmolCheckbox> |
| <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lg/1lgh_consurf.spt"</scriptWhenChecked> | | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lg/1lgh_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
| <text>to colour the structure by Evolutionary Conservation</text> | | <text>to colour the structure by Evolutionary Conservation</text> |
| </jmolCheckbox> | | </jmolCheckbox> |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Atcc 14031]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Hu, X]] | + | [[Category: Magnetospirillum molischianum]] |
- | [[Category: Koepke, J]] | + | [[Category: Hu X]] |
- | [[Category: Michel, H]] | + | [[Category: Koepke J]] |
- | [[Category: Schulten, K]] | + | [[Category: Michel H]] |
- | [[Category: Bacteriochlorophyll]]
| + | [[Category: Schulten K]] |
- | [[Category: Dexter energy transfer]]
| + | |
- | [[Category: Foerster exciton transfer mechanism]]
| + | |
- | [[Category: Light harvesting complex]]
| + | |
- | [[Category: Membrane protein]]
| + | |
- | [[Category: Photosynthesis]]
| + | |
| Structural highlights
Function
LHB1_MAGML Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
BACKGROUND: The light-harvesting complexes II (LH-2s) are integral membrane proteins that form ring-like structures, oligomers of alpha beta-heterodimers, in the photosynthetic membranes of purple bacteria. They contain a large number of chromophores organized optimally for light absorption and rapid light energy migration. Recently, the structure of the nonameric LH-2 of Rhodopseudomonas acidophila has been determined; we report here the crystal structure of the octameric LH-2 from Rhodospirillum molischianum. The unveiling of similarities and differences in the architecture of these proteins may provide valuable insight into the efficient energy transfer mechanisms of bacterial photosynthesis. RESULTS: The crystal structure of LH-2 from Rs. molischianum has been determined by molecular replacement at 2.4 A resolution using X-ray diffraction. The crystal structure displays two concentric cylinders of sixteen membrane-spanning helical subunits, containing two rings of bacteriochlorophyll-a (BChl-a) molecules. One ring comprises sixteen B850 BChl-as perpendicular to the membrane plane and the other eight B800 BChl-as that are nearly parallel to the membrane plane; eight membrane-spanning lycopenes (the major carotenoid in this complex) stretch out between the B800 and B850 BChl-as. The B800 BChl-as exhibit a different ligation from that of Rps. acidophila (aspartate is the Mg ligand as opposed to formyl-methionine in Rps. acidophila). CONCLUSIONS: The light-harvesting complexes from different bacteria assume various ring sizes. In LH-2 of Rs. molischianum, the Qy transition dipole moments of neighbouring B850 and B800 BChl-as are nearly parallel to each other, that is, they are optimally aligned for Foster exciton transfer. Dexter energy transfer between these chlorophylls is also possible through interactions mediated by lycopenes and B850 BChl-a phytyl tails; the B800 BChl-a and one of the two B850 BChl-as associated with each heterodimeric unit are in van der Waals distance to a lycopene, such that singlet and triplet energy transfer between lycopene and the BChl-as can occur by the Dexter mechanism. The ring structure of the B850 BChl-as is optimal for light energy transfer in that it samples all spatial absorption and emission characteristics and places all oscillator strength into energetically low lying, thermally accessible exciton states.
The crystal structure of the light-harvesting complex II (B800-850) from Rhodospirillum molischianum.,Koepke J, Hu X, Muenke C, Schulten K, Michel H Structure. 1996 May 15;4(5):581-97. PMID:8736556[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Koepke J, Hu X, Muenke C, Schulten K, Michel H. The crystal structure of the light-harvesting complex II (B800-850) from Rhodospirillum molischianum. Structure. 1996 May 15;4(5):581-97. PMID:8736556
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