6oq7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:15, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6oq7' size='340' side='right'caption='[[6oq7]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
<StructureSection load='6oq7' size='340' side='right'caption='[[6oq7]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6oq7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_difficilis"_hall_and_o'toole_1935 "bacillus difficilis" hall and o'toole 1935] and [http://en.wikipedia.org/wiki/Camelidae Camelidae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OQ7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6OQ7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6oq7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Camelidae Camelidae] and [https://en.wikipedia.org/wiki/Clostridioides_difficile Clostridioides difficile]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OQ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6OQ7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tcdB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1496 "Bacillus difficilis" Hall and O'Toole 1935])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6oq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oq7 OCA], [http://pdbe.org/6oq7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6oq7 RCSB], [http://www.ebi.ac.uk/pdbsum/6oq7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6oq7 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6oq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6oq7 OCA], [https://pdbe.org/6oq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6oq7 RCSB], [https://www.ebi.ac.uk/pdbsum/6oq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6oq7 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TCDB2_CLODI TCDB2_CLODI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 19:
</div>
</div>
<div class="pdbe-citations 6oq7" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6oq7" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Antibody 3D structures|Antibody 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus difficilis hall and o'toole 1935]]
 
[[Category: Camelidae]]
[[Category: Camelidae]]
 +
[[Category: Clostridioides difficile]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Chen, P]]
+
[[Category: Chen P]]
-
[[Category: Jin, R]]
+
[[Category: Jin R]]
-
[[Category: Lam, K]]
+
[[Category: Lam K]]
-
[[Category: Toxin]]
+
-
[[Category: Toxin vhh]]
+

Current revision

Structure of the GTD domain of Clostridium difficile toxin B in complex with VHH E3

PDB ID 6oq7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools