2yzm

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<StructureSection load='2yzm' size='340' side='right'caption='[[2yzm]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
<StructureSection load='2yzm' size='340' side='right'caption='[[2yzm]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2yzm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2yzm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DAL:D-ALANINE'>DAL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yzg|2yzg]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAL:D-ALANINE'>DAL</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--D-alanine_ligase D-alanine--D-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.4 6.3.2.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzm OCA], [https://pdbe.org/2yzm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzm RCSB], [https://www.ebi.ac.uk/pdbsum/2yzm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzm ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzm TOPSAN]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzm OCA], [http://pdbe.org/2yzm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yzm RCSB], [http://www.ebi.ac.uk/pdbsum/2yzm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzm ProSAT], [http://www.topsan.org/Proteins/RSGI/2yzm TOPSAN]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/DDL_THET8 DDL_THET8]] Cell wall formation.[HAMAP-Rule:MF_00047]
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[https://www.uniprot.org/uniprot/DDL_THET8 DDL_THET8] Cell wall formation.[HAMAP-Rule:MF_00047]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: D-alanine--D-alanine ligase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Thet8]]
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[[Category: Thermus thermophilus HB8]]
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[[Category: Kitamura, Y]]
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[[Category: Kitamura Y]]
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[[Category: Kuramitsu, S]]
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[[Category: Kuramitsu S]]
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[[Category: Structural genomic]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S]]
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[[Category: Cell shape]]
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[[Category: D-alanine:d-alanine ligase]]
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[[Category: Ligase]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Peptidoglycan synthesis]]
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[[Category: Rsgi]]
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Current revision

Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8

PDB ID 2yzm

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