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| <StructureSection load='5o0w' size='340' side='right'caption='[[5o0w]], [[Resolution|resolution]] 2.57Å' scene=''> | | <StructureSection load='5o0w' size='340' side='right'caption='[[5o0w]], [[Resolution|resolution]] 2.57Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5o0w]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Alpaca Alpaca] and [http://en.wikipedia.org/wiki/Tryci Tryci]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O0W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O0W FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5o0w]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_congolense_IL3000 Trypanosoma congolense IL3000] and [https://en.wikipedia.org/wiki/Vicugna_pacos Vicugna pacos]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O0W FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.57Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TCIL3000_10_4760 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1068625 TRYCI])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-bisphosphate_aldolase Fructose-bisphosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.13 4.1.2.13] </span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o0w OCA], [https://pdbe.org/5o0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o0w RCSB], [https://www.ebi.ac.uk/pdbsum/5o0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o0w ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o0w OCA], [http://pdbe.org/5o0w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o0w RCSB], [http://www.ebi.ac.uk/pdbsum/5o0w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o0w ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/G0UWE7_TRYCI G0UWE7_TRYCI] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Alpaca]] | |
- | [[Category: Fructose-bisphosphate aldolase]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Tryci]] | + | [[Category: Trypanosoma congolense IL3000]] |
- | [[Category: Magez, S]] | + | [[Category: Vicugna pacos]] |
- | [[Category: Pinto, J]] | + | [[Category: Magez S]] |
- | [[Category: Sterckx, Y]] | + | [[Category: Pinto J]] |
- | [[Category: Aldolase]] | + | [[Category: Sterckx Y]] |
- | [[Category: Complex]]
| + | |
- | [[Category: Diagnosis]]
| + | |
- | [[Category: Lyase]]
| + | |
- | [[Category: Nanobody]]
| + | |
| Structural highlights
Function
G0UWE7_TRYCI
Publication Abstract from PubMed
BACKGROUND: Animal African trypanosomosis (AAT) is a neglected tropical disease which imposes a heavy burden on the livestock industry in Sub-Saharan Africa. Its causative agents are Trypanosoma parasites, with T. congolense and T. vivax being responsible for the majority of the cases. Recently, we identified a Nanobody (Nb474) that was employed to develop a homologous sandwich ELISA targeting T. congolense fructose-1,6-bisphosphate aldolase (TcoALD). Despite the high sequence identity between trypanosomatid aldolases, the Nb474-based immunoassay is highly specific for T. congolense detection. The results presented in this paper yield insights into the molecular principles underlying the assay's high specificity. METHODOLOGY/PRINCIPAL FINDINGS: The structure of the Nb474-TcoALD complex was determined via X-ray crystallography. Together with analytical gel filtration, the structure reveals that a single TcoALD tetramer contains four binding sites for Nb474. Through a comparison with the crystal structures of two other trypanosomatid aldolases, TcoALD residues Ala77 and Leu106 were identified as hot spots for specificity. Via ELISA and surface plasmon resonance (SPR), we demonstrate that mutation of these residues does not abolish TcoALD recognition by Nb474, but does lead to a lack of detection in the Nb474-based homologous sandwich immunoassay. CONCLUSIONS/SIGNIFICANCE: The results show that the high specificity of the Nb474-based immunoassay is not determined by the initial recognition event between Nb474 and TcoALD, but rather by its homologous sandwich design. This (i) provides insights into the optimal set-up of the assay, (ii) may be of great significance for field applications as it could explain the potential detection escape of certain T. congolense strains, and (iii) may be of general interest to those developing similar assays.
Structural basis for the high specificity of a Trypanosoma congolense immunoassay targeting glycosomal aldolase.,Pinto J, Odongo S, Lee F, Gaspariunaite V, Muyldermans S, Magez S, Sterckx YG PLoS Negl Trop Dis. 2017 Sep 15;11(9):e0005932. doi:, 10.1371/journal.pntd.0005932. PMID:28915239[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Pinto J, Odongo S, Lee F, Gaspariunaite V, Muyldermans S, Magez S, Sterckx YG. Structural basis for the high specificity of a Trypanosoma congolense immunoassay targeting glycosomal aldolase. PLoS Negl Trop Dis. 2017 Sep 15;11(9):e0005932. doi:, 10.1371/journal.pntd.0005932. PMID:28915239 doi:http://dx.doi.org/10.1371/journal.pntd.0005932
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