6u1q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 6u1q is ON HOLD until Paper Publication Authors: Tripathi, S.M., Schwechheimer, C., Herbert, K., Porcella, M.E., Brown, E.R., Yildiz, F.H., Rubin, S...)
Current revision (07:42, 11 October 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6u1q is ON HOLD until Paper Publication
+
==Crystal Structure of VpsO (VC0937) Kinase domain==
 +
<StructureSection load='6u1q' size='340' side='right'caption='[[6u1q]], [[Resolution|resolution]] 2.87&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6u1q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6U1Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6U1Q FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.87&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6u1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6u1q OCA], [https://pdbe.org/6u1q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6u1q RCSB], [https://www.ebi.ac.uk/pdbsum/6u1q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6u1q ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9KTG5_VIBCH Q9KTG5_VIBCH]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Production of an extracellular matrix is essential for biofilm formation, as this matrix both secures and protects the cells it encases. Mechanisms underlying production and assembly of matrices are poorly understood. Vibrio cholerae, relies heavily on biofilm formation for survival, infectivity, and transmission. Biofilm formation requires Vibrio polysaccharide (VPS), which is produced by vps gene-products, yet the function of these products remains unknown. Here, we demonstrate that the vps gene-products vpsO and vpsU encode respectively for a tyrosine kinase and a cognate tyrosine phosphatase. Collectively, VpsO and VpsU act as a tyrosine phosphoregulatory system to modulate VPS production. We present structures of VpsU and the kinase domain of VpsO, and we report observed autocatalytic tyrosine phosphorylation of the VpsO C-terminal tail. The position and amount of tyrosine phosphorylation in the VpsO C-terminal tail represses VPS production and biofilm formation through a mechanism involving the modulation of VpsO oligomerization. We found that tyrosine phosphorylation enhances stability of VpsO. Regulation of VpsO phosphorylation by the phosphatase VpsU is vital for maintaining native VPS levels. This study provides new insights into the mechanism and regulation of VPS production and establishes general principles of biofilm matrix production and its inhibition.
-
Authors: Tripathi, S.M., Schwechheimer, C., Herbert, K., Porcella, M.E., Brown, E.R., Yildiz, F.H., Rubin, S.M.
+
A tyrosine phosphoregulatory system controls exopolysaccharide biosynthesis and biofilm formation in Vibrio cholerae.,Schwechheimer C, Hebert K, Tripathi S, Singh PK, Floyd KA, Brown ER, Porcella ME, Osorio J, Kiblen JTM, Pagliai FA, Drescher K, Rubin SM, Yildiz FH PLoS Pathog. 2020 Aug 25;16(8):e1008745. doi: 10.1371/journal.ppat.1008745., eCollection 2020 Aug. PMID:32841296<ref>PMID:32841296</ref>
-
Description: Crystal Structure of VpsO (VC0937) Kinase domain
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Porcella, M.E]]
+
<div class="pdbe-citations 6u1q" style="background-color:#fffaf0;"></div>
-
[[Category: Yildiz, F.H]]
+
== References ==
-
[[Category: Rubin, S.M]]
+
<references/>
-
[[Category: Tripathi, S.M]]
+
__TOC__
-
[[Category: Schwechheimer, C]]
+
</StructureSection>
-
[[Category: Brown, E.R]]
+
[[Category: Large Structures]]
-
[[Category: Herbert, K]]
+
[[Category: Vibrio cholerae]]
 +
[[Category: Brown ER]]
 +
[[Category: Herbert K]]
 +
[[Category: Porcella ME]]
 +
[[Category: Rubin SM]]
 +
[[Category: Schwechheimer C]]
 +
[[Category: Tripathi SM]]
 +
[[Category: Yildiz FH]]

Current revision

Crystal Structure of VpsO (VC0937) Kinase domain

PDB ID 6u1q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools