|
|
(One intermediate revision not shown.) |
Line 3: |
Line 3: |
| <StructureSection load='3zvh' size='340' side='right'caption='[[3zvh]], [[Resolution|resolution]] 1.99Å' scene=''> | | <StructureSection load='3zvh' size='340' side='right'caption='[[3zvh]], [[Resolution|resolution]] 1.99Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3zvh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"clostridium_tetanomorphum"_bulloch_et_al._1919 "clostridium tetanomorphum" bulloch et al. 1919]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZVH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZVH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3zvh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_tetanomorphum Clostridium tetanomorphum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZVH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZVH FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99Å</td></tr> |
- | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kcz|1kcz]], [[1kd0|1kd0]], [[3zvi|3zvi]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zvh OCA], [https://pdbe.org/3zvh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zvh RCSB], [https://www.ebi.ac.uk/pdbsum/3zvh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zvh ProSAT]</span></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methylaspartate_ammonia-lyase Methylaspartate ammonia-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.2 4.3.1.2] </span></td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zvh OCA], [http://pdbe.org/3zvh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3zvh RCSB], [http://www.ebi.ac.uk/pdbsum/3zvh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3zvh ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/MAAL_CLOTT MAAL_CLOTT] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
Line 23: |
Line 23: |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Clostridium tetanomorphum bulloch et al. 1919]] | + | [[Category: Clostridium tetanomorphum]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Methylaspartate ammonia-lyase]]
| + | [[Category: Dekker FJ]] |
- | [[Category: Dekker, F J]] | + | [[Category: Feringa BL]] |
- | [[Category: Feringa, B L]] | + | [[Category: Janssen DB]] |
- | [[Category: Janssen, D B]] | + | [[Category: Poelarends GJ]] |
- | [[Category: Poelarends, G J]] | + | [[Category: Quax WJ]] |
- | [[Category: Quax, W J]] | + | [[Category: Raj H]] |
- | [[Category: Raj, H]] | + | [[Category: Reis CR]] |
- | [[Category: Reis, C R]] | + | [[Category: Rozeboom HJ]] |
- | [[Category: Rozeboom, H J]] | + | [[Category: Szymanski W]] |
- | [[Category: Szymanski, W]] | + | [[Category: Thunnissen AMWH]] |
- | [[Category: Thunnissen, A M.W H]] | + | [[Category: Veetil VP]] |
- | [[Category: Veetil, V P]] | + | [[Category: De Villiers J]] |
- | [[Category: Villiers, J de]] | + | [[Category: De Villiers M]] |
- | [[Category: Villiers, M de]] | + | [[Category: De Wildeman S]] |
- | [[Category: Wildeman, S de]] | + | |
- | [[Category: Enolase]]
| + | |
- | [[Category: Lyase]]
| + | |
| Structural highlights
3zvh is a 2 chain structure with sequence from Clostridium tetanomorphum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
| Method: | X-ray diffraction, Resolution 1.99Å |
Ligands: | , , , , |
Resources: | FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT |
Function
MAAL_CLOTT
Publication Abstract from PubMed
The redesign of enzymes to produce catalysts for a predefined transformation remains a major challenge in protein engineering. Here, we describe the structure-based engineering of methylaspartate ammonia lyase (which in nature catalyses the conversion of 3-methylaspartate to ammonia and 2-methylfumarate) to accept a variety of substituted amines and fumarates and catalyse the asymmetric synthesis of aspartic acid derivatives. We obtained two single-active-site mutants, one exhibiting a wide nucleophile scope including structurally diverse linear and cyclic alkylamines and one with broad electrophile scope including fumarate derivatives with alkyl, aryl, alkoxy, aryloxy, alkylthio and arylthio substituents at the C2 position. Both mutants have an enlarged active site that accommodates the new substrates while retaining the high stereo- and regioselectivity of the wild-type enzyme. As an example, we demonstrate a highly enantio- and diastereoselective synthesis of threo-3-benzyloxyaspartate (an important inhibitor of neuronal excitatory glutamate transporters in the brain).
Engineering methylaspartate ammonia lyase for the asymmetric synthesis of unnatural amino acids.,Raj H, Szymanski W, de Villiers J, Rozeboom HJ, Veetil VP, Reis CR, de Villiers M, Dekker FJ, de Wildeman S, Quax WJ, Thunnissen AM, Feringa BL, Janssen DB, Poelarends GJ Nat Chem. 2012 Apr 29;4(6):478-84. doi: 10.1038/nchem.1338. PMID:22614383[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Raj H, Szymanski W, de Villiers J, Rozeboom HJ, Veetil VP, Reis CR, de Villiers M, Dekker FJ, de Wildeman S, Quax WJ, Thunnissen AM, Feringa BL, Janssen DB, Poelarends GJ. Engineering methylaspartate ammonia lyase for the asymmetric synthesis of unnatural amino acids. Nat Chem. 2012 Apr 29;4(6):478-84. doi: 10.1038/nchem.1338. PMID:22614383 doi:10.1038/nchem.1338
|