6kv2

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'''Unreleased structure'''
 
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The entry 6kv2 is ON HOLD
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==Crystal structure of trypsin inhibitor 1 from Senna obtusifolia==
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<StructureSection load='6kv2' size='340' side='right'caption='[[6kv2]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6kv2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Senna_obtusifolia Senna obtusifolia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KV2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KV2 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.003&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6kv2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kv2 OCA], [https://pdbe.org/6kv2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6kv2 RCSB], [https://www.ebi.ac.uk/pdbsum/6kv2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6kv2 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A097P6E1_9FABA A0A097P6E1_9FABA]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Although digestive resistance of Kunitz protease inhibitors has been reported extensively, the molecular mechanism is not well established. In the present study, the first X-ray structure of Cassia obtusifolia trypsin inhibitor (COTI), a member of Kunitz protease inhibitors, was solved at a resolution of 1.9 A. The structure adopted a classic beta-trefoil fold with the inhibitory loop protruding from the hydrophobic core. The role of Phe139, a unique residue in Kunitz protease inhibitors, and Arg63 in the COTI structure was verified by F139A and R63E mutants. COTI was a specific inhibitor of bovine trypsin and the result was also verified by COTI-trypsin complex formation. Meanwhile, COTI showed equivalent inhibitory activity with that of soybean trypsin inhibitor against bovine trypsin and midgut trypsin from Pieris rapae. The F139 and R63E mutants further indicated that inhibitory specificity and efficiency of COTI were closely related to the global framework, the conformation and the amino acid composition of reactive loop. Finally, a midgut trypsin from P. rapae (PrSP40), which might be involve in the food digestion, was proposed to be a potential target of COTI and might be a promising target for future crop-protection strategy. The results supported the digestive resistance of COTI.
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Authors: Liao, H., Yu, Y.
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Structural and functional relationship of Cassia obtusifolia trypsin inhibitor to understand its digestive resistance against Pieris rapae.,Zhou J, Li C, Chen A, Zhu J, Zou M, Liao H, Yu Y Int J Biol Macromol. 2020 Jan 22;148:908-920. doi:, 10.1016/j.ijbiomac.2020.01.193. PMID:31981663<ref>PMID:31981663</ref>
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Description: Crystal structure of trypsin inhibitor 1 from Senna obtusifolia
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Yu, Y]]
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<div class="pdbe-citations 6kv2" style="background-color:#fffaf0;"></div>
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[[Category: Liao, H]]
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==See Also==
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*[[Trypsin inhibitor 3D structures|Trypsin inhibitor 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Senna obtusifolia]]
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[[Category: Liao H]]
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[[Category: Yu Y]]

Current revision

Crystal structure of trypsin inhibitor 1 from Senna obtusifolia

PDB ID 6kv2

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