6spc
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6spc is ON HOLD Authors: Halfon, Y., Jimenez-Fernande, A., La Ros, R., Espinos, R., Krogh Johansen, H., Matzov, D., Eyal, Z., Bashan, A., Zimmerman,...) |
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- | '''Unreleased structure''' | ||
- | + | ==Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate== | |
+ | <SX load='6spc' size='340' side='right' viewer='molstar' caption='[[6spc]], [[Resolution|resolution]] 2.95Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6spc]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SPC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SPC FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.95Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6spc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6spc OCA], [https://pdbe.org/6spc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6spc RCSB], [https://www.ebi.ac.uk/pdbsum/6spc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6spc ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Resistance to antibiotics has become a major threat to modern medicine. The ribosome plays a fundamental role in cell vitality by the translation of the genetic code into proteins; hence, it is a major target for clinically useful antibiotics. We report here the cryo-electron microscopy structures of the ribosome of a pathogenic aminoglycoside (AG)-resistant Pseudomonas aeruginosa strain, as well as of a nonresistance strain isolated from a cystic fibrosis patient. The structural studies disclosed defective ribosome complex formation due to a conformational change of rRNA helix H69, an essential intersubunit bridge, and a secondary binding site of the AGs. In addition, a stable conformation of nucleotides A1486 and A1487, pointing into helix h44, is created compared to a non-AG-bound ribosome. We suggest that altering the conformations of ribosomal protein uL6 and rRNA helix H69, which interact with initiation-factor IF2, interferes with proper protein synthesis initiation. | ||
- | + | Structure of Pseudomonas aeruginosa ribosomes from an aminoglycoside-resistant clinical isolate.,Halfon Y, Jimenez-Fernandez A, La Rosa R, Espinosa Portero R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A Proc Natl Acad Sci U S A. 2019 Oct 14. pii: 1909831116. doi:, 10.1073/pnas.1909831116. PMID:31611393<ref>PMID:31611393</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 6spc" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | |
- | [[Category: | + | ==See Also== |
- | [[Category: | + | *[[Ribosome 3D structures|Ribosome 3D structures]] |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </SX> |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Pseudomonas aeruginosa]] |
- | [[Category: | + | [[Category: Bashan A]] |
- | [[Category: | + | [[Category: Belousoff M]] |
+ | [[Category: Espinos R]] | ||
+ | [[Category: Eyal Z]] | ||
+ | [[Category: Halfon Y]] | ||
+ | [[Category: Jimenez-Fernande A]] | ||
+ | [[Category: Krogh Johansen H]] | ||
+ | [[Category: La Ros R]] | ||
+ | [[Category: Matzov D]] | ||
+ | [[Category: Molin S]] | ||
+ | [[Category: Yonath A]] | ||
+ | [[Category: Zimmerman E]] |
Current revision
Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate
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