6spd
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Pseudomonas aeruginosa 50s ribosome from a clinical isolate== | |
+ | <SX load='6spd' size='340' side='right' viewer='molstar' caption='[[6spd]], [[Resolution|resolution]] 3.28Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6spd]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SPD FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.28Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6spd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6spd OCA], [https://pdbe.org/6spd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6spd RCSB], [https://www.ebi.ac.uk/pdbsum/6spd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6spd ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/A0A241XHA2_PSEAI A0A241XHA2_PSEAI] One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.[HAMAP-Rule:MF_01320] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Resistance to antibiotics has become a major threat to modern medicine. The ribosome plays a fundamental role in cell vitality by the translation of the genetic code into proteins; hence, it is a major target for clinically useful antibiotics. We report here the cryo-electron microscopy structures of the ribosome of a pathogenic aminoglycoside (AG)-resistant Pseudomonas aeruginosa strain, as well as of a nonresistance strain isolated from a cystic fibrosis patient. The structural studies disclosed defective ribosome complex formation due to a conformational change of rRNA helix H69, an essential intersubunit bridge, and a secondary binding site of the AGs. In addition, a stable conformation of nucleotides A1486 and A1487, pointing into helix h44, is created compared to a non-AG-bound ribosome. We suggest that altering the conformations of ribosomal protein uL6 and rRNA helix H69, which interact with initiation-factor IF2, interferes with proper protein synthesis initiation. | ||
- | + | Structure of Pseudomonas aeruginosa ribosomes from an aminoglycoside-resistant clinical isolate.,Halfon Y, Jimenez-Fernandez A, La Rosa R, Espinosa Portero R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A Proc Natl Acad Sci U S A. 2019 Oct 14. pii: 1909831116. doi:, 10.1073/pnas.1909831116. PMID:31611393<ref>PMID:31611393</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 6spd" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | |
- | [[Category: | + | ==See Also== |
- | [[Category: | + | *[[Ribosome 3D structures|Ribosome 3D structures]] |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </SX> |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Pseudomonas aeruginosa]] |
- | [[Category: | + | [[Category: Bashan A]] |
- | [[Category: | + | [[Category: Belousoff M]] |
+ | [[Category: Espinos R]] | ||
+ | [[Category: Eyal Z]] | ||
+ | [[Category: Halfon Y]] | ||
+ | [[Category: Jimenez-Fernande A]] | ||
+ | [[Category: Krogh Johansen H]] | ||
+ | [[Category: La Ros R]] | ||
+ | [[Category: Matzov D]] | ||
+ | [[Category: Molin S]] | ||
+ | [[Category: Yonath A]] | ||
+ | [[Category: Zimmerman E]] |
Current revision
Pseudomonas aeruginosa 50s ribosome from a clinical isolate
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