This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6l3u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 6l3u is ON HOLD Authors: Lee, H.J., Jeong, H., Ryu, B., Hyun, J., Woo, J.S. Description: Human Cx31.3/GJC3 connexin hemichannel in the presence of ...)
Current revision (07:21, 30 September 2020) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6l3u is ON HOLD
+
==Human Cx31.3/GJC3 connexin hemichannel in the presence of calcium==
 +
<StructureSection load='6l3u' size='340' side='right'caption='[[6l3u]], [[Resolution|resolution]] 2.53&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6l3u]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L3U OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6L3U FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=LMN:LAURYL+MALTOSE+NEOPENTYL+GLYCOL'>LMN</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GJC3, GJE1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6l3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l3u OCA], [http://pdbe.org/6l3u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6l3u RCSB], [http://www.ebi.ac.uk/pdbsum/6l3u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6l3u ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/CXG3_HUMAN CXG3_HUMAN]] One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Connexin family proteins assemble into hexameric channels called hemichannels/connexons, which function as transmembrane channels or dock together to form gap junction intercellular channels (GJIChs). We determined the cryo-electron microscopy structures of human connexin 31.3 (Cx31.3)/GJC3 hemichannels in the presence and absence of calcium ions and with a hearing-loss mutation R15G at 2.3-, 2.5-, and 2.6-A resolutions, respectively. Compared with available structures of GJICh in open conformation, Cx31.3 hemichannel shows substantial structural changes of highly conserved regions in the connexin family, including opening of calcium ion-binding tunnels, reorganization of salt-bridge networks, exposure of lipid-binding sites, and collocation of amino-terminal helices at the cytoplasmic entrance. We also found that the hemichannel has a pore with a diameter of ~8 A and selectively transports chloride ions. Our study provides structural insights into the permeant selectivity of Cx31.3 hemichannel.
-
Authors: Lee, H.J., Jeong, H., Ryu, B., Hyun, J., Woo, J.S.
+
Cryo-EM structure of human Cx31.3/GJC3 connexin hemichannel.,Lee HJ, Jeong H, Hyun J, Ryu B, Park K, Lim HH, Yoo J, Woo JS Sci Adv. 2020 Aug 28;6(35):eaba4996. doi: 10.1126/sciadv.aba4996. eCollection, 2020 Aug. PMID:32923625<ref>PMID:32923625</ref>
-
Description: Human Cx31.3/GJC3 connexin hemichannel in the presence of calcium
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Lee, H.J]]
+
<div class="pdbe-citations 6l3u" style="background-color:#fffaf0;"></div>
-
[[Category: Woo, J.S]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Human]]
 +
[[Category: Large Structures]]
[[Category: Hyun, J]]
[[Category: Hyun, J]]
-
[[Category: Ryu, B]]
 
[[Category: Jeong, H]]
[[Category: Jeong, H]]
 +
[[Category: Lee, H J]]
 +
[[Category: Ryu, B]]
 +
[[Category: Woo, J S]]
 +
[[Category: Atp release]]
 +
[[Category: Gap junction]]
 +
[[Category: Hemichannel]]
 +
[[Category: Hexamer]]
 +
[[Category: Membrane protein]]

Current revision

Human Cx31.3/GJC3 connexin hemichannel in the presence of calcium

PDB ID 6l3u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools