This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6upn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6upn" [edit=sysop:move=sysop])
Current revision (09:29, 20 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6upn is ON HOLD
+
==Endophilin B1 helical scaffold==
-
 
+
<StructureSection load='6upn' size='340' side='right'caption='[[6upn]], [[Resolution|resolution]] 10.00&Aring;' scene=''>
-
Authors: Bhatt, V.S., Sundborger-Lunna, A.C.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[6upn]] is a 48 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UPN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6UPN FirstGlance]. <br>
-
Description: Endophilin B1 helical scaffold
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 10&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6upn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6upn OCA], [https://pdbe.org/6upn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6upn RCSB], [https://www.ebi.ac.uk/pdbsum/6upn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6upn ProSAT]</span></td></tr>
-
[[Category: Sundborger-Lunna, A.C]]
+
</table>
-
[[Category: Bhatt, V.S]]
+
== Function ==
 +
[https://www.uniprot.org/uniprot/SHLB1_HUMAN SHLB1_HUMAN] May be required for normal outer mitochondrial membrane dynamics (PubMed:15452144). Required for coatomer-mediated retrograde transport in certain cells (By similarity). May recruit other proteins to membranes with high curvature. May promote membrane fusion (PubMed:11604418). Involved in activation of caspase-dependent apoptosis by promoting BAX/BAK1 activation (PubMed:16227588). Isoform 1 acts proapoptotic in fibroblasts (By similarity). Involved in caspase-independent apoptosis during nutrition starvation and involved in the regulation of autophagy. Activates lipid kinase activity of PIK3C3 during autophagy probably by associating with the PI3K complex II (PI3KC3-C2) (PubMed:17891140). Associated with PI3KC3-C2 during autophagy may regulate the trafficking of ATG9A from the Golgi complex to the peripheral cytoplasm for the formation of autophagosomes by inducing Golgi membrane tubulation and fragmentation (PubMed:21068542). Involved in regulation of degradative endocytic trafficking and cytokinesis, probably in the context of PI3KC3-C2 (PubMed:20643123). Isoform 2 acts antiapoptotic in neuronal cells; involved in maintenance of mitochondrial morphology and promotes neuronal viability (By similarity).[UniProtKB:Q9JK48]<ref>PMID:11604418</ref> <ref>PMID:15452144</ref> <ref>PMID:17891140</ref> <ref>PMID:20643123</ref> <ref>PMID:21068542</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Bhatt VS]]
 +
[[Category: Sundborger-Lunna AC]]

Current revision

Endophilin B1 helical scaffold

PDB ID 6upn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools