6ht5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:38, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6ht5' size='340' side='right'caption='[[6ht5]], [[Resolution|resolution]] 3.45&Aring;' scene=''>
<StructureSection load='6ht5' size='340' side='right'caption='[[6ht5]], [[Resolution|resolution]] 3.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6ht5]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HT5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HT5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6ht5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HT5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HT5 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ht5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ht5 OCA], [http://pdbe.org/6ht5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ht5 RCSB], [http://www.ebi.ac.uk/pdbsum/6ht5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ht5 ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.451&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ht5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ht5 OCA], [https://pdbe.org/6ht5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ht5 RCSB], [https://www.ebi.ac.uk/pdbsum/6ht5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ht5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PO5F1_MOUSE PO5F1_MOUSE]] Transcription factor that binds to the octamer motif (5'-ATTTGCAT-3'). Forms a trimeric complex with SOX2 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency.<ref>PMID:17496161</ref> <ref>PMID:17525163</ref> [[http://www.uniprot.org/uniprot/SOX2_MOUSE SOX2_MOUSE]] Transcription factor that forms a trimeric complex with OCT4 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency. May function as a switch in neuronal development. Downstream SRRT target that mediates the promotion of neural stem cell self-renewal. Keeps neural cells undifferentiated by counteracting the activity of proneural proteins and suppresses neuronal differentiation (By similarity).<ref>PMID:17097055</ref> <ref>PMID:22198669</ref>
+
[https://www.uniprot.org/uniprot/SOX2_MOUSE SOX2_MOUSE] Transcription factor that forms a trimeric complex with OCT4 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency. May function as a switch in neuronal development. Downstream SRRT target that mediates the promotion of neural stem cell self-renewal. Keeps neural cells undifferentiated by counteracting the activity of proneural proteins and suppresses neuronal differentiation (By similarity).<ref>PMID:17097055</ref> <ref>PMID:22198669</ref>
 +
 
 +
==See Also==
 +
*[[OCT4 and SOX2 transcription factors|OCT4 and SOX2 transcription factors]]
== References ==
== References ==
<references/>
<references/>
Line 13: Line 17:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Groves, M]]
+
[[Category: Mus musculus]]
-
[[Category: Meusch, D]]
+
[[Category: Groves M]]
-
[[Category: Pogenberg, V]]
+
[[Category: Meusch D]]
-
[[Category: Vahokoski, J]]
+
[[Category: Pogenberg V]]
-
[[Category: Wilmanns, M]]
+
[[Category: Vahokoski J]]
-
[[Category: Cell reprogramming]]
+
[[Category: Wilmanns M]]
-
[[Category: Dna binding]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription factor]]
+

Current revision

Oct4/Sox2:UTF1 structure

PDB ID 6ht5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools