2uz9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:58, 13 December 2023) (edit) (undo)
 
(18 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2uz9.gif|left|200px]]<br />
 
-
<applet load="2uz9" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2uz9, resolution 2.30&Aring;" />
 
-
'''HUMAN GUANINE DEAMINASE (GUAD) IN COMPLEX WITH ZINC AND ITS PRODUCT XHANTINE.'''<br />
 
-
==About this Structure==
+
==Human guanine deaminase (guaD) in complex with zinc and its product Xanthine.==
-
2UZ9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with ZN and XAN as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Guanine_deaminase Guanine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.3 3.5.4.3] Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2UZ9 OCA].
+
<StructureSection load='2uz9' size='340' side='right'caption='[[2uz9]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
[[Category: Guanine deaminase]]
+
== Structural highlights ==
-
[[Category: Homo sapiens]]
+
<table><tr><td colspan='2'>[[2uz9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UZ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UZ9 FirstGlance]. <br>
-
[[Category: Single protein]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
[[Category: Arrowsmith, C.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=XAN:XANTHINE'>XAN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[Category: Berglund, H.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uz9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uz9 OCA], [https://pdbe.org/2uz9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uz9 RCSB], [https://www.ebi.ac.uk/pdbsum/2uz9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uz9 ProSAT]</span></td></tr>
-
[[Category: Busam, R.]]
+
</table>
-
[[Category: Collins, R.]]
+
== Function ==
-
[[Category: Dahlgren, L.G.]]
+
[https://www.uniprot.org/uniprot/GUAD_HUMAN GUAD_HUMAN] Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia (By similarity).
-
[[Category: Edwards, A.]]
+
== Evolutionary Conservation ==
-
[[Category: Flodin, S.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Flores, A.]]
+
Check<jmol>
-
[[Category: Graslund, S.]]
+
<jmolCheckbox>
-
[[Category: Hallberg, B.M.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uz/2uz9_consurf.spt"</scriptWhenChecked>
-
[[Category: Hammarstrom, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Holmberg-Schiavone, L.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Johansson, I.]]
+
</jmolCheckbox>
-
[[Category: Kallas, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uz9 ConSurf].
-
[[Category: Karlberg, T.]]
+
<div style="clear:both"></div>
-
[[Category: Kotenyova, T.]]
+
-
[[Category: Lehtio, L.]]
+
-
[[Category: Moche, M.]]
+
-
[[Category: Nordlund, P.]]
+
-
[[Category: Nyman, T.]]
+
-
[[Category: Ogg, D.]]
+
-
[[Category: Persson, C.]]
+
-
[[Category: Sagemark, J.]]
+
-
[[Category: Sgc, Structural.Genomics.Consortium.]]
+
-
[[Category: Stenmark, P.]]
+
-
[[Category: Sundstrom, M.]]
+
-
[[Category: Thorsell, A.G.]]
+
-
[[Category: Van-Den-Berg, S.]]
+
-
[[Category: Weigelt, J.]]
+
-
[[Category: Welin, M.]]
+
-
[[Category: XAN]]
+
-
[[Category: ZN]]
+
-
[[Category: guanine aminohydrolase]]
+
-
[[Category: hydrolase]]
+
-
[[Category: purine metabolism]]
+
-
[[Category: zinc]]
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 5 18:42:01 2007''
+
==See Also==
 +
*[[Deaminase 3D structures|Deaminase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Arrowsmith C]]
 +
[[Category: Berglund H]]
 +
[[Category: Busam R]]
 +
[[Category: Collins R]]
 +
[[Category: Dahlgren LG]]
 +
[[Category: Edwards A]]
 +
[[Category: Flodin S]]
 +
[[Category: Flores A]]
 +
[[Category: Graslund S]]
 +
[[Category: Hallberg BM]]
 +
[[Category: Hammarstrom M]]
 +
[[Category: Holmberg-Schiavone L]]
 +
[[Category: Johansson I]]
 +
[[Category: Kallas A]]
 +
[[Category: Karlberg T]]
 +
[[Category: Kotenyova T]]
 +
[[Category: Lehtio L]]
 +
[[Category: Moche M]]
 +
[[Category: Nordlund P]]
 +
[[Category: Nyman T]]
 +
[[Category: Ogg D]]
 +
[[Category: Persson C]]
 +
[[Category: Sagemark J]]
 +
[[Category: Stenmark P]]
 +
[[Category: Sundstrom M]]
 +
[[Category: Thorsell AG]]
 +
[[Category: Weigelt J]]
 +
[[Category: Welin M]]
 +
[[Category: Van den berg S]]

Current revision

Human guanine deaminase (guaD) in complex with zinc and its product Xanthine.

PDB ID 2uz9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools