Mannosidase
From Proteopedia
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== Function == | == Function == | ||
| - | '''Mannosidase''' (MAN) is an enzyme which hydrolyzes mannose. There are 2 kinds of MAN. '''α-MAN''' which hydrolyzes α-mannose<ref>PMID:12634058</ref> and '''β-MAN''' which hydrolyzes β-1,4-linked manno-oligosaccharides<ref>PMID:10553664</ref>. α-MAN isozymes are classified as class I and II. | + | '''Mannosidase''' (MAN) is an enzyme which hydrolyzes mannose. There are 2 kinds of MAN. '''α-MAN''' which hydrolyzes α-mannose<ref>PMID:12634058</ref> and '''β-MAN''' which hydrolyzes β-1,4-linked manno-oligosaccharides<ref>PMID:10553664</ref>. α-MAN isozymes are classified as class I and II. |
| + | * '''Mannan endo-1,4-β-MAN''' hydrolyzes 1-4-β-D-mannosidic linkages in mannans, galactomannans and glucomannans. | ||
| + | * '''Endo-1,2-α-MAN''' is the Endo-acting glycoside hydrolase involved in N-glycan trimming located in the Golgi<ref>PMID:33154157</ref> | ||
| + | See some details in [[Molecular Playground/ERMan1]]. See also [[Carbohydrate Metabolism]]. | ||
== Disease == | == Disease == | ||
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</StructureSection> | </StructureSection> | ||
| - | ==3D structures of mannosidase== | ||
| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| - | *α-MAN | ||
| - | |||
| - | **[[1o7d]] - αMAN – bovine<br /> | ||
| - | **[[6b9o]] - jbMAN – jack bean<br /> | ||
| - | **[[2wvy]], [[2ww2]], [[4acy]], [[4acz]], [[4ad0]], [[4c1s]] - αMAN - ''Bacterioides thetaiotaomicron''<br /> | ||
| - | **[[1hcu]] - TrαMAN – ''Trichoderma reesei''<br /> | ||
| - | |||
| - | *α-MAN class I | ||
| - | |||
| - | **[[1fmi]] - hαMAN I - human<br /> | ||
| - | **[[1fo2]] - hαMAN I + deoxymannojirimycin<br /> | ||
| - | **[[1fo3]] - hαMAN I+ kifunensine<br /> | ||
| - | **[[1x9d]] - hαMAN I residues 243-699 + polysaccharide analog<br /> | ||
| - | **[[1nxc]] - mαMAN I + mannose – mouse<br /> | ||
| - | **[[6b9p]] - jbMAN + inhibitor<br /> | ||
| - | **[[5jm0]] - yαMAN I – yeast<br /> | ||
| - | **[[1dl2]] - yαMAN I catalytic domain + mannose <br /> | ||
| - | **[[1g6i]] - yαMAN I + deoxymannojirimycin<br /> | ||
| - | **[[2ri8]] - PcαMAN I + glycerol – ''Penicillium citrinum''<br /> | ||
| - | **[[1kre]], [[1kkt]] - PcαMAN I + mannose<br /> | ||
| - | **[[2ri9]] - PcαMAN I + substrate analog<br /> | ||
| - | **[[1krf]] - PcαMAN I + kifunensine + mannose<br /> | ||
| - | |||
| - | |||
| - | *α-MAN class II | ||
| - | |||
| - | **[[2wyh]] - SpαMAN II – ''Streptococcus pyrogenes''<br /> | ||
| - | **[[3bub]], [[1hty]] - DmαMAN II catalytic domain – ''Drosophila melanogaster''<br /> | ||
| - | **[[3bud]] - DmαMAN II catalytic domain (mutant) <br /> | ||
| - | **[[3bui]] - DmαMAN II catalytic domain (mutant) + Tris<br /> | ||
| - | **[[3bup]], [[3buq]], [[3czs]] - DmαMAN II catalytic domain (mutant) + mannose<br /> | ||
| - | **[[3bvt]], [[3bvu]], [[3bvv]], [[3bvw]], [[3bvx]] - DmαMAN II catalytic domain (mutant) + mannopyranoside<br /> | ||
| - | **[[1r33]], [[1r34]] - DmαMAN II catalytic domain + mannopyranoside<br /> | ||
| - | **[[3ddf]], [[3ddg]], [[2f18]], [[2f1a]], [[2f1b]] - DmαMAN II catalytic domain + pyrrolidin<br /> | ||
| - | **[[2alw]] - DmαMAN II catalytic domain + noeuromycin<br /> | ||
| - | **[[3cv5]] - DmαMAN II catalytic domain + polysaccharide<br /> | ||
| - | **[[3czn]] - DmαMAN II catalytic domain (mutant) + polysaccharide<br /> | ||
| - | **[[2wyi]] - SpαMAN II + swainsonine<br /> | ||
| - | **[[3blb]], [[1hww]] - DmαMAN II + swainsonine<br /> | ||
| - | **[[3ejp]], [[3ejq]], [[3ejr]], [[3ejs]], [[3ejt]], [[3eju]], [[2ow6]], [[2ow7]] - DmαMAN II catalytic domain + swainsonine analog<br /> | ||
| - | **[[3dx0]], [[3dx2]], [[2f7o]] - DmαMAN II catalytic domain + mannostatine<br /> | ||
| - | **[[3dx1]], [[3dx3]], [[3dx4]], [[2f7p]] - DmαMAN II catalytic domain + mannostatine analog<br /> | ||
| - | **[[3d4y]], [[3d4z]] - DmαMAN II catalytic domain + imidazole derivative<br /> | ||
| - | **[[3d50]], [[3d51]], [[3d52]] - DmαMAN II catalytic domain + inhibitor<br /> | ||
| - | **[[2fyv]], [[2f7q]], [[2f7r]] - DmαMAN II catalytic domain + amino-salacinol carboxylate analog<br /> | ||
| - | **[[1tqv]], [[1tqw]], [[1tqs]], [[1tqt]], [[1tqu]] - DmαMAN II catalytic domain (mutant) + seleno-salacinol<br /> | ||
| - | **[[1ps3]] - DmαMAN II catalytic domain + kifunensine<br /> | ||
| - | **[[1qwn]] - DmαMAN II catalytic domain + intermediate<br /> | ||
| - | **[[1hxk]] - DmαMAN II catalytic domain + deoxymannojirimycin<br /> | ||
| - | **[[1qwu]] - DmαMAN II catalytic domain (mutant) + guloside<br /> | ||
| - | **[[1qx1]] - DmαMAN II catalytic domain (mutant) + mannosyl | ||
| - | |||
| - | *α-1,2-MAN | ||
| - | |||
| - | **[[4ayo]] – CaαMAN - ''Caulobacter''<br /> | ||
| - | **[[4ayp]], [[4ayq]], [[5meh]] – CaαMAN + mannose derivative<br /> | ||
| - | **[[4ayr]] – CaαMAN + noeuromycin<br /> | ||
| - | **[[5ne5]] – CaαMAN + kifunensine<br /> | ||
| - | **[[5kkb]] – mαMAN + mannose derivative<br /> | ||
| - | **[[5kij]] – hαMAN + mannose derivative<br /> | ||
| - | **[[5kk7]] – hαMAN (mutant) + disaccharide derivative<br /> | ||
| - | |||
| - | *β-MAN | ||
| - | |||
| - | **[[6dtt]] - mMAN <br /> | ||
| - | **[[6ddu]] - mMAN + β-mannose <br /> | ||
| - | **[[2je8]] - BtβMAN residues 26-864 <br /> | ||
| - | **[[2wbk]] - BtβMAN residues 26-864 + mannopyranoside <br /> | ||
| - | **[[2vqt]], [[2vr4]], [[2vjx]], [[2vl4]], [[2vmf]], [[2vo5]], [[2vot]], [[2vqu]] - BtβMAN residues 26-864 + piperidine derivative<br /> | ||
| - | **[[1oh4]], [[1of4]] - TmβMAN catalytic domain + mannose – ''Thermotoga maritima''<br /> | ||
| - | **[[1of3]] - TmβMAN catalytic domain<br /> | ||
| - | **[[1uz4]] - CmβMAN + inhibitor – ''Cellvibrio mixtus''<br /> | ||
| - | **[[1uuq]] - CmβMAN<br /> | ||
| - | **[[2whk]] - βMAN – ''Bacillus subtilis''<br /> | ||
| - | **[[4jho]] - rβMAN – rice<br /> | ||
| - | **[[4jie]] - rβMAN + β-mannose<br /> | ||
| - | **[[4cvu]], [[4uoj]] – βMAN - ''Trichoderma harzianum''<br /> | ||
| - | **[[5n6u]] - βMAN + β-mannose – ''Dictyoglomus thermophilum''<br /> | ||
| - | **[[6byc]] - XaMAN – ''Xanthomonas axonopodis''<br /> | ||
| - | **[[6byg]], [[6byi]] - XaMAN (mutant)<br /> | ||
| - | **[[6bye]] - XaMAN + β-mannose<br /> | ||
| - | **[[4zxo]] - MAN – ''Bacterioides ovatus''<br /> | ||
| - | **[[2whj]] - BaMAN – ''Bacillus agaradhaerens''<br /> | ||
| - | **[[2whl]] - BaMAN + β-mannose <br /> | ||
| - | |||
| - | *Mannan endo-1,4-β-MAN | ||
| - | |||
| - | **[[1gvy]], [[1odz]], [[1gw1]], [[2whm]] - PcβMAN (mutant) + mannose derivative – ''Pseudomonas cellulosa''<br /> | ||
| - | **[[1j9y]], [[1r7o]] - PcβMAN<br /> | ||
| - | **[[2c0h]] - βMAN (mutant) – blue mussel<br /> | ||
| - | **[[2whk]], [[4yn5]], [[3jug]], [[2qha]] - βMAN – ''Bacillus subtilis''<br /> | ||
| - | **[[1rh9]] – βMAN – ''Solanum lycopersicum''<br /> | ||
| - | **[[3pz9]], [[3pzg]] – TpβMAN – ''Thermotoga petrophila''<br /> | ||
| - | **[[3pzi]] – TpβMAN + glucose<br /> | ||
| - | **[[3pzm]], [[3pzn]] – TpβMAN + glycerol<br /> | ||
| - | **[[3pzo]], [[3pzq]] – TpβMAN + maltose<br /> | ||
| - | **[[3ziz]] - βMAN – ''Podspora anserina''<br /> | ||
| - | **[[3wh9]] - βMAN – ''Aspergillus niger''<br /> | ||
| - | **[[1qns]], [[1qnr]], [[1qnq]], [[1qnp]], [[1qno]] - TrMAN <br /> | ||
| - | |||
| - | *Endo-α-MAN | ||
| - | |||
| - | **[[4utf]] - BxαMAN – ''Bacterioides xylanisolvens''<br /> | ||
| - | **[[4ad5]], [[4ad4]], [[4ad3]], [[4ad2]], [[4ad1]] – BxαMAN + mannose derivative<br /> | ||
| - | |||
| - | *Exo-β-1,4-MAN | ||
| - | |||
| - | **[[4lyp]] - RmβMAN – ''Rhizomucor miehei''<br /> | ||
| - | **[[4lyq]], [[4lyr]] - RmβMAN (mutant)<br /> | ||
| - | **[[4nrr]] - RmβMAN (mutant) + mannosyl-fructose<br /> | ||
| - | **[[4nrs]] - RmβMAN (mutant) + mannobiose<br /> | ||
| - | **[[6gvb]] - βMAN – ''Cutibacterium acnes''<br /> | ||
| - | |||
| - | *Exo-α-1,6-MAN | ||
| - | |||
| - | **[[5m7i]] - CpαMAN (mutant) + mannobiose – ''Clostridium perfringenes''<br /> | ||
| - | **[[5m7y]] - CpαMAN (mutant) + mannotriose <br /> | ||
| - | **[[6rqk]] - CpMAN + mannoimidazole<br /> | ||
| - | |||
| - | *β-MAN/β-glucosidase | ||
| - | |||
| - | **[[4re2]], [[4re3]], [[4re4]] - rβMAN/βGLU <br /> | ||
| - | |||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
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[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
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References
- ↑ Heikinheimo P, Helland R, Leiros HK, Leiros I, Karlsen S, Evjen G, Ravelli R, Schoehn G, Ruigrok R, Tollersrud OK, McSweeney S, Hough E. The structure of bovine lysosomal alpha-mannosidase suggests a novel mechanism for low-pH activation. J Mol Biol. 2003 Mar 28;327(3):631-44. PMID:12634058
- ↑ Ademark P, Lundqvist J, Hagglund P, Tenkanen M, Torto N, Tjerneld F, Stalbrand H. Hydrolytic properties of a beta-mannosidase purified from Aspergillus niger. J Biotechnol. 1999 Oct 8;75(2-3):281-9. PMID:10553664
- ↑ Sobala LF, Fernandes PZ, Hakki Z, Thompson AJ, Howe JD, Hill M, Zitzmann N, Davies S, Stamataki Z, Butters TD, Alonzi DS, Williams SJ, Davies GJ. Structure of human endo-alpha-1,2-mannosidase (MANEA), an antiviral host-glycosylation target. Proc Natl Acad Sci U S A. 2020 Nov 5. pii: 2013620117. doi:, 10.1073/pnas.2013620117. PMID:33154157 doi:http://dx.doi.org/10.1073/pnas.2013620117
- ↑ Berg T, Riise HM, Hansen GM, Malm D, Tranebjaerg L, Tollersrud OK, Nilssen O. Spectrum of mutations in alpha-mannosidosis. Am J Hum Genet. 1999 Jan;64(1):77-88. PMID:9915946 doi:http://dx.doi.org/S0002-9297(07)61660-7
- ↑ Uchino Y, Fukushige T, Yotsumoto S, Hashiguchi T, Taguchi H, Suzuki N, Konohana I, Kanzaki T. Morphological and biochemical studies of human beta-mannosidosis: identification of a novel beta-mannosidase gene mutation. Br J Dermatol. 2003 Jul;149(1):23-9. PMID:12890191
- ↑ Tankrathok A, Iglesias-Fernandez J, Luang S, Robinson RC, Kimura A, Rovira C, Hrmova M, Ketudat Cairns JR. Structural analysis and insights into the glycon specificity of the rice GH1 Os7BGlu26 beta-D-mannosidase. Acta Crystallogr D Biol Crystallogr. 2013 Oct;69(Pt 10):2124-35. doi:, 10.1107/S0907444913020568. Epub 2013 Sep 20. PMID:24100330 doi:http://dx.doi.org/10.1107/S0907444913020568

