6l56

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6l56" [edit=sysop:move=sysop])
Current revision (10:51, 22 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6l56 is ON HOLD
+
==Fe(II) loaded Tegillarca granosa ferritin==
 +
<StructureSection load='6l56' size='340' side='right'caption='[[6l56]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6l56]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Tegillarca_granosa Tegillarca granosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L56 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6L56 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8530058&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6l56 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l56 OCA], [https://pdbe.org/6l56 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6l56 RCSB], [https://www.ebi.ac.uk/pdbsum/6l56 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6l56 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D3JCC5_TEGGR D3JCC5_TEGGR] Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.[RuleBase:RU361145]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
In addition to its role as an iron storage protein, ferritin can function as a major detoxification component in the innate immune defense, and Cu(2+) ions can also play crucial antibacterial roles in the blood clam, Tegillarca granosa. However, the mechanism of interaction between iron and copper in recombinant Tegillarca granosa ferritin (TgFer) remains to be investigated. In this study, we investigated the crystal structure of TgFer and examined the effects of Fe(2+) and Cu(2+) ions on the TgFer structure and catalytic activity. The crystal structure revealed that TgFer presented a typically 4-3-2 symmetry in a cage-like, spherical shell composed of 24 identical subunits, featuring highly conserved organization in both the ferroxidase center and the 3-fold channel. Structural and biochemical analyses indicated that the 4-fold channel of TgFer could be serviced as potential binding sites of metal ions. Cu(2+) ions appear to bind preferentially with the 3-fold channel as well as ferroxidase site over Fe(2+) ions, possibly inhibiting the ferroxidase activity of TgFer. Our results present a structural and functional characterization of TgFer, providing mechanistic insight into the interactions between TgFer and both Fe(2+) and Cu(2+) ions.
-
Authors: Jiang, Q.Q., Su, X.R., Ming, T.H., Huan, H.S.
+
Structural Insights Into the Effects of Interactions With Iron and Copper Ions on Ferritin From the Blood Clam Tegillarca granosa.,Ming T, Jiang Q, Huo C, Huan H, Wu Y, Su C, Qiu X, Lu C, Zhou J, Li Y, Han J, Zhang Z, Su X Front Mol Biosci. 2022 Mar 11;9:800008. doi: 10.3389/fmolb.2022.800008., eCollection 2022. PMID:35359603<ref>PMID:35359603</ref>
-
Description: Fe(II) loaded Tegillarca granosa ferritin
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Jiang, Q.Q]]
+
<div class="pdbe-citations 6l56" style="background-color:#fffaf0;"></div>
-
[[Category: Ming, T.H]]
+
 
-
[[Category: Su, X.R]]
+
==See Also==
-
[[Category: Huan, H.S]]
+
*[[Ferritin 3D structures|Ferritin 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Tegillarca granosa]]
 +
[[Category: Huan HS]]
 +
[[Category: Jiang QQ]]
 +
[[Category: Ming TH]]
 +
[[Category: Su XR]]

Current revision

Fe(II) loaded Tegillarca granosa ferritin

PDB ID 6l56

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools