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Methyl CpG binding protein 3D structures

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(New page: ==3D structures of methyl CpG binding protein== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Methyl CpG binding...)
Current revision (09:41, 28 June 2023) (edit) (undo)
 
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**[[5w9q]] – hMBD1 zinc finger domain + DNA <br />
**[[5w9q]] – hMBD1 zinc finger domain + DNA <br />
-
*Methyl CpG binding protein 2 (MBD2)); Domains - MBD 77-167; coiled-coil 137-178;
+
*Methyl CpG binding protein 2 (MBD2) or MeCP2; Domains - MBD 77-167; coiled-coil 137-178;
 +
**[[7ao8]], [[7ao9]], [[7aoa]] – hMBD2 + MTA1 + HDAC1 + RBBP4 – Cryo EM<br />
**[[2l2l]] - hMBD2 coiled-coil domain + transcriptional repressor p66-α coiled-coil domain – NMR<br />
**[[2l2l]] - hMBD2 coiled-coil domain + transcriptional repressor p66-α coiled-coil domain – NMR<br />
-
**[[6ogj]], [[6ogk]] – hMBD2 MBD + DNA <br />
+
**[[6ogj]], [[6ogk]], [[6yww]] – hMBD2 MBD + DNA <br />
**[[5bt2]] – hMBD2 MBD + methylated DNA <br />
**[[5bt2]] – hMBD2 MBD + methylated DNA <br />
**[[1qk9]] - hMCP2 MBD domain – NMR<br />
**[[1qk9]] - hMCP2 MBD domain – NMR<br />
**[[3c2i]] – hMCP2 MBD domain (mutant) + DNA<br />
**[[3c2i]] – hMCP2 MBD domain (mutant) + DNA<br />
-
**[[6cnp]], [[6cnq]], [[6c2f]], [[6c1y]], [[6c1v]], [[6c1u]], [[6c1t]], [[6c1a]] – hMCP2 residues 143-220 + DNA<br />
+
**[[6cnp]], [[6cnq]], [[6c2f]], [[6c1y]], [[6c1v]], [[6c1u]], [[6c1t]], [[6c1a]], [[7mwk]], [[7mwm]], [[7ray]] – hMCP2 residues 143-220 + DNA<br />
 +
**[[8ajr]], [[8alq]] – hMCP2 residues 101-193 - NMR<br />
**[[2ky8]] – cMBD2 MBD domain + DNA containing cytidine and uridine derivatives - NMR - chicken<br />
**[[2ky8]] – cMBD2 MBD domain + DNA containing cytidine and uridine derivatives - NMR - chicken<br />
**[[1ub1]] – cMCP2 MBD domain – NMR<br />
**[[1ub1]] – cMCP2 MBD domain – NMR<br />
Line 28: Line 30:
**[[6cev]], [[6ceu]], [[6ccg]], [[6cc8]] – hMBD3 MBD domain + DNA <br />
**[[6cev]], [[6ceu]], [[6ccg]], [[6cc8]] – hMBD3 MBD domain + DNA <br />
-
*Methyl CpG binding protein 4 (MBD4)
+
*Methyl CpG binding protein 4 (MBD4)); Domains – MBD 83-149; glycosylate 426-580
**[[3iho]], [[4e9e]] – hMBD4 glycosylate domain<br />
**[[3iho]], [[4e9e]] – hMBD4 glycosylate domain<br />
**[[4e9g]] – hMBD4 glycosylate domain + DNA <br />
**[[4e9g]] – hMBD4 glycosylate domain + DNA <br />
-
**[[4dk9]], [[4e9f]] – hMBD4 glycosylate domain + DNA containing abasic dideoxyribose<br />
+
**[[4dk9]], [[4e9f]], [[7kz1]], [[7kzg]] – hMBD4 glycosylate domain + DNA containing abasic dideoxyribose<br />
 +
**[[7kz0]] – hMBD4 glycosylate domain + DNA containing pseudo-uridine<br />
**[[4e9h]], [[4ea4]], [[4ea5]] – hMBD4 glycosylate domain (mutant) + DNA containing hydroxymethyluracil<br />
**[[4e9h]], [[4ea4]], [[4ea5]] – hMBD4 glycosylate domain (mutant) + DNA containing hydroxymethyluracil<br />
**[[4lg7]], [[2moe]] – hMBD4 MBD + DNA containing cytidine derivative<br />
**[[4lg7]], [[2moe]] – hMBD4 MBD + DNA containing cytidine derivative<br />
-
**[[5chz]] – hMBD4 MBD + DNA containing mismatch<br />
+
**[[5chz]], [[6vjw]] – hMBD4 MBD + DNA containing mismatch<br />
**[[4ofa]], [[4ofe]], [[4ofh]] – hMBD4 MBD (mutant) + DNA containing mismatch<br />
**[[4ofa]], [[4ofe]], [[4ofh]] – hMBD4 MBD (mutant) + DNA containing mismatch<br />
**[[1ngn]] - mMBD4 glycosylate domain – mouse<br />
**[[1ngn]] - mMBD4 glycosylate domain – mouse<br />
Line 43: Line 46:
**[[3vxv]], [[3vxx]], [[3vyb]], [[3vyq]] – mMBD4 MBD + DNA containing cytidine derivative<br />
**[[3vxv]], [[3vxx]], [[3vyb]], [[3vyq]] – mMBD4 MBD + DNA containing cytidine derivative<br />
-
Methyl CpG binding protein 11 (MBD11)
+
*Methyl CpG binding protein 5 (MBD5)
-
**[[6acv]] – MBD11 MBD domain – ''Arabidopsis thaliana'' - NMR<br />
+
**[[7feo]] – AtMBD5 MBD domain – ''Arabidopsis thaliana'' - NMR<br />
 +
 
 +
*Methyl CpG binding protein 6 (MBD6)
 +
 
 +
**[[7fef]] – AtMBD6 101-193 <br />
 +
 
 +
*Methyl CpG binding protein 8 (MBD8)
 +
 
 +
**[[7d8k]] – AtMBD8 MBD domain - NMR<br />
 +
 
 +
*Methyl CpG binding protein 11 (MBD11)
 +
 
 +
**[[6acv]] – AtMBD11 MBD domain - NMR<br />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D structures of methyl CpG binding protein

Updated on 28-June-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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