6qrl

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'''Unreleased structure'''
 
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The entry 6qrl is ON HOLD until Paper Publication
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==Crystal structure of ShkA _Rec1 in complex with c-di-GMP==
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<StructureSection load='6qrl' size='340' side='right'caption='[[6qrl]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6qrl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caulobacter_vibrioides_CB15 Caulobacter vibrioides CB15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QRL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QRL FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qrl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qrl OCA], [https://pdbe.org/6qrl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qrl RCSB], [https://www.ebi.ac.uk/pdbsum/6qrl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qrl ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9ABT2_CAUVC Q9ABT2_CAUVC]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Cytosolic hybrid histidine kinases (HHKs) constitute major signaling nodes that control various biological processes, but their input signals and how these are processed are largely unknown. In Caulobacter crescentus, the HHK ShkA is essential for accurate timing of the G1-S cell cycle transition and is regulated by the corresponding increase in the level of the second messenger c-di-GMP. Here, we use a combination of X-ray crystallography, NMR spectroscopy, functional analyses, and kinetic modeling to reveal the regulatory mechanism of ShkA. In the absence of c-di-GMP, ShkA predominantly adopts a compact domain arrangement that is catalytically inactive. C-di-GMP binds to the dedicated pseudoreceiver domain Rec1, thereby liberating the canonical Rec2 domain from its central position where it obstructs the large-scale motions required for catalysis. Thus, c-di-GMP cannot only stabilize domain interactions, but also engage in domain dissociation to allosterically invoke a downstream effect. Enzyme kinetics data are consistent with conformational selection of the ensemble of active domain constellations by the ligand and show that autophosphorylation is a reversible process.
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Authors: Dubey, B.N., Schirmer, T.
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Hybrid histidine kinase activation by cyclic di-GMP-mediated domain liberation.,Dubey BN, Agustoni E, Bohm R, Kaczmarczyk A, Mangia F, von Arx C, Jenal U, Hiller S, Plaza-Menacho I, Schirmer T Proc Natl Acad Sci U S A. 2019 Dec 27. pii: 1911427117. doi:, 10.1073/pnas.1911427117. PMID:31882446<ref>PMID:31882446</ref>
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Description: Crystal structure of ShkA _Rec1 in complex with c-di-GMP
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Dubey, B.N]]
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<div class="pdbe-citations 6qrl" style="background-color:#fffaf0;"></div>
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[[Category: Schirmer, T]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Caulobacter vibrioides CB15]]
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[[Category: Large Structures]]
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[[Category: Dubey BN]]
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[[Category: Schirmer T]]

Current revision

Crystal structure of ShkA _Rec1 in complex with c-di-GMP

PDB ID 6qrl

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