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| ==SOLUTION STRUCTURE OF REDUCED CU(I) PLASTOCYANIN FROM SYNECHOCYSTIS PCC6803== | | ==SOLUTION STRUCTURE OF REDUCED CU(I) PLASTOCYANIN FROM SYNECHOCYSTIS PCC6803== |
- | <StructureSection load='1jxd' size='340' side='right'caption='[[1jxd]], [[NMR_Ensembles_of_Models | 1 NMR models]]' scene=''> | + | <StructureSection load='1jxd' size='340' side='right'caption='[[1jxd]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[1jxd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aphanocapsa_sp._(strain_n-1) Aphanocapsa sp. (strain n-1)]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JXD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JXD FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1jxd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JXD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JXD FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1i0w|1i0w]], [[1i0y|1i0y]], [[1jxf|1jxf]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jxd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jxd OCA], [http://pdbe.org/1jxd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jxd RCSB], [http://www.ebi.ac.uk/pdbsum/1jxd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1jxd ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jxd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jxd OCA], [https://pdbe.org/1jxd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jxd RCSB], [https://www.ebi.ac.uk/pdbsum/1jxd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jxd ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/PLAS_SYNY3 PLAS_SYNY3]] Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.[HAMAP-Rule:MF_00566] | + | [https://www.uniprot.org/uniprot/PLAS_SYNY3 PLAS_SYNY3] Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.[HAMAP-Rule:MF_00566] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| </div> | | </div> |
| <div class="pdbe-citations 1jxd" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 1jxd" style="background-color:#fffaf0;"></div> |
| + | |
| + | ==See Also== |
| + | *[[Plastocyanin 3D structures|Plastocyanin 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Bertini, I]] | + | [[Category: Synechocystis sp. PCC 6803]] |
- | [[Category: Bryant, D A]] | + | [[Category: Bertini I]] |
- | [[Category: Ciurli, S]] | + | [[Category: Bryant DA]] |
- | [[Category: Dikiy, A]] | + | [[Category: Ciurli S]] |
- | [[Category: Fernandez, C O]] | + | [[Category: Dikiy A]] |
- | [[Category: Luchinat, C]] | + | [[Category: Fernandez CO]] |
- | [[Category: Safarov, N]] | + | [[Category: Luchinat C]] |
- | [[Category: Vila, A J]] | + | [[Category: Safarov N]] |
- | [[Category: Zhao, J]] | + | [[Category: Vila AJ]] |
- | [[Category: Copper protein beta barrel electron transfer]]
| + | [[Category: Zhao J]] |
- | [[Category: Electron transport]]
| + | |
| Structural highlights
Function
PLAS_SYNY3 Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.[HAMAP-Rule:MF_00566]
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
A model-free analysis based on (15)N R(1), (15)N R(2), and (15)N-(1)H nuclear Overhauser effects was performed on reduced (diamagnetic) and oxidized (paramagnetic) forms of plastocyanin from Synechocystis sp. PCC6803. The protein backbone is rigid, displaying a small degree of mobility in the sub-nanosecond time scale. The loops surrounding the copper ion, involved in physiological electron transfer, feature a higher extent of flexibility in the longer time scale in both redox states, as measured from D(2)O exchange of amide protons and from NH-H(2)O saturation transfer experiments. In contrast to the situation for other electron transfer proteins, no significant difference in the dynamic properties is found between the two redox forms. A solution structure was also determined for the reduced plastocyanin and compared with the solution structure of the oxidized form in order to assess possible structural changes related to the copper ion redox state. Within the attained resolution, the structure of the reduced plastocyanin is indistinguishable from that of the oxidized form, even though small chemical shift differences are observed. The present characterization provides information on both the structural and dynamic behavior of blue copper proteins in solution that is useful to understand further the role(s) of protein dynamics in electron transfer processes.
Backbone dynamics of plastocyanin in both oxidation states. Solution structure of the reduced form and comparison with the oxidized state.,Bertini I, Bryant DA, Ciurli S, Dikiy A, Fernandez CO, Luchinat C, Safarov N, Vila AJ, Zhao J J Biol Chem. 2001 Dec 14;276(50):47217-26. Epub 2001 Aug 16. PMID:11509552[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Bertini I, Bryant DA, Ciurli S, Dikiy A, Fernandez CO, Luchinat C, Safarov N, Vila AJ, Zhao J. Backbone dynamics of plastocyanin in both oxidation states. Solution structure of the reduced form and comparison with the oxidized state. J Biol Chem. 2001 Dec 14;276(50):47217-26. Epub 2001 Aug 16. PMID:11509552 doi:10.1074/jbc.M100304200
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