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Nucleoporin 3D structures

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(New page: == 3D Structures of Nucleoporin == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *NUP2 **3n7c – NUP2 RANBD ...)
Current revision (09:42, 15 August 2023) (edit) (undo)
 
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Line 15: Line 15:
**[[4i79]] – hNUP43 + polypeptide - human<br />
**[[4i79]] – hNUP43 + polypeptide - human<br />
*NUP50
*NUP50
-
**[[2ec1]] – hNUP50 RANBD <br />
+
**[[2ec1]] – hNUP50 RANBD 337-468 <br />
 +
**[[7mo0]] - hNUP50 RANBD + RAN<br />
**[[3tj3]] - hNUP50 NTD+importin<br />
**[[3tj3]] - hNUP50 NTD+importin<br />
**[[2c1m]] – mNUP50 NTD +importin <br />
**[[2c1m]] – mNUP50 NTD +importin <br />
Line 47: Line 48:
**[[4xmm]] - yNUP84+NUP85+NUP120+NUP145+protein Seh1 + antibody<br />
**[[4xmm]] - yNUP84+NUP85+NUP120+NUP145+protein Seh1 + antibody<br />
**[[4xmn]] - yNUP84+NUP85+NUP120+NUP145 + antibody<br />
**[[4xmn]] - yNUP84+NUP85+NUP120+NUP145 + antibody<br />
 +
**[[6x02]], [[6x03]] – yNUP84 + NUP133 + nanobody<br />
*NUP85
*NUP85
**[[3f3f]], [[3f3g]], [[3f3p]], [[3ewe]] – yNUP85+Seh1<br />
**[[3f3f]], [[3f3g]], [[3f3p]], [[3ewe]] – yNUP85+Seh1<br />
 +
**[[6x08]] - yNUP85+Seh1 + nanobody<br />
 +
*NUP88
 +
**[[7mni]] – hNUP88 NTD 1-493 + NUP98 715-863<br />
 +
 +
*NUP93
 +
 +
**[[7mw0]] – hNUP93 174-819<br />
 +
**[[7mw1]] – hNUP93 174-819 + NUP53 84-150<br />
 +
*NUP96
 +
**[[7nqa]] – fNUP96 + nanobody<br />
*NUP98
*NUP98
**[[3mmy]] – hNUP98 fragment+mRNA export factor <br />
**[[3mmy]] – hNUP98 fragment+mRNA export factor <br />
-
**[[2q5x]], [[2q5y]] – hNUP98 CTD<br />
+
**[[1ko6]], [[2q5x]], [[2q5y]] – hNUP98 CTD<br />
-
**[[1ko6]] – hNUP98 CTD<br />
+
**[[7q65]], [[7q66]], [[7q67]] – hNUP98 85-124 – Cryo EM<br />
 +
**[[7now]] – fNUP98 + nanobody<br />
 +
**[[7nq6]] – fNUP98 CTD <br />
*NUP100
*NUP100
**[[3nf5]] – NUP100 CTD – ''Candida glabrata''<br />
**[[3nf5]] – NUP100 CTD – ''Candida glabrata''<br />
Line 61: Line 75:
*NUP120
*NUP120
**[[3f7f]], [[3h7n]], [[3hxr]] – yNUP120<br />
**[[3f7f]], [[3h7n]], [[3hxr]] – yNUP120<br />
 +
**[[6x06]] – yNUP120 + nanobody<br />
*NUP133
*NUP133
**[[1xks]], [[4q9t]] – hNUP133 NTD<br />
**[[1xks]], [[4q9t]] – hNUP133 NTD<br />
**[[3kfo]] – yNUP133 CTD <br />
**[[3kfo]] – yNUP133 CTD <br />
 +
**[[6x04]], [[6x05]] – yNUP133 + nanobody<br />
*NUP145
*NUP145
**[[3bg0]], [[3bg1]] – hNUP145+Sec13-related protein<br />
**[[3bg0]], [[3bg1]] – hNUP145+Sec13-related protein<br />
Line 73: Line 89:
**[[5tvz]] – yNUP152 Ig-like repeats - NMR<br />
**[[5tvz]] – yNUP152 Ig-like repeats - NMR<br />
*NUP153
*NUP153
-
**[[3gj3]], [[3gj4]], [[3gj5]], [[3gj6]], [[3gj7]], [[3gj8]], [[3ch5]] – hNUP153+RAN<br />
+
**[[7mo1]] – hNUP153 zinc finger 1 648-687 +RAN<br />
 +
**[[3gj3]], [[3gj4]], [[3gj5]], [[3gj6]], [[3gj7]], [[3gj8]], [[3ch5]], [[7mo3]], [[7mo4]] – hNUP153 zinc finger 2 723-750 +RAN <br />
 +
**[[7mo5]] – hNUP153 zinc finger 4 838-874 +RAN<br />
**[[2ebq]], [[2ebr]], [[2ebv]], [[2gqe]] - hNUP153 RANBD – NMR<br />
**[[2ebq]], [[2ebr]], [[2ebv]], [[2gqe]] - hNUP153 RANBD – NMR<br />
**[[2k0c]] – rNUP153 RANBD – NMR<br />
**[[2k0c]] – rNUP153 RANBD – NMR<br />
 +
**[[7mo2]] - rNUP153 zinc finger 2 +RAN<br />
 +
 +
*NUP155
 +
 +
**[[7r1y]] – hNUP155 NTD 19-981 – Cryo EM<br />
 +
**[[7eyf]] – hNUP155 CTD 864-1337 – Cryo EM<br />
 +
**[[7eye]] – NUP155 19-863 – RVSV – Cryo EM<br />
 +
**[[7eyq]] – NUP155 19-1069 – RVSV – Cryo EM<br />
*NUP157
*NUP157
**[[4mhc]] – hNUP157 NTD<br />
**[[4mhc]] – hNUP157 NTD<br />
Line 89: Line 115:
**[[5hax]] – CtNUP170 NTD + CtNUP53 peptide<br />
**[[5hax]] – CtNUP170 NTD + CtNUP53 peptide<br />
*NUP188
*NUP188
-
**[[5cwu]] – CtNUP192 tail domain<br />
+
**[[47wo9]] – yNUP188 – Cryo EM<br />
 +
**[[5cwu]] – CtNUP188 tail domain<br />
 +
**[[7mvw]] – CtNUP188 NTD 1-1134<br />
 +
**[[7mvx]] – CtNUP188 + Nic96 peptide<br />
 +
**[[7mvy]] – CtNUP188 + Nic96 peptide – Cryo EM<br />
 +
**[[7mvz]] – CtNUP188 + NUP145 640-732 + Nic96 peptide – Cryo EM<br />
 +
 
*NUP192
*NUP192
**[[4ifq]] – yNUP192<br />
**[[4ifq]] – yNUP192<br />
**[[5hb4]] – CtNUP192 <br />
**[[5hb4]] – CtNUP192 <br />
 +
**[[7mvu]] – CtNUP192 1-1756 + Nic96 – Cryo EM<br />
 +
**[[7mvt]] – CtNUP192 185-1756 + Nic96 <br />
**[[5cwv]] – CtNUP192 tail domain<br />
**[[5cwv]] – CtNUP192 tail domain<br />
*NUP214
*NUP214
Line 103: Line 137:
**[[5owu]] – NUP1P+Kap95 complex<br />
**[[5owu]] – NUP1P+Kap95 complex<br />
*NUP2P
*NUP2P
-
**[[1un0]] – yNUP2P NTD+importrin α subunit<br />
+
**[[1un0]] – yNUP2P NTD+imporrin α subunit<br />
*NUP-NSP1
*NUP-NSP1
**[[1o6o]] – yNUP-NSP1 residues 497-608+importrin β subunit<br />
**[[1o6o]] – yNUP-NSP1 residues 497-608+importrin β subunit<br />
Line 114: Line 148:
**[[6b4e]] – yNUP-Gle1 + NUP42 <br />
**[[6b4e]] – yNUP-Gle1 + NUP42 <br />
**[[6b4g]], [[6b4h]] – CtNUP-Gle1 + NUP Amo1 <br />
**[[6b4g]], [[6b4h]] – CtNUP-Gle1 + NUP Amo1 <br />
 +
*NUP-Nic96
 +
**[[2rfo]], [[2qx5]] – yNic96<br />
 +
**[[6x07]] – yNic96 + nanobody<br />
 +
**[[5hb2]] – CtNic96 <br />
 +
**[[1gyb]] – NUP+yNTF2<br />
 +
 +
*NUP-SEH1
 +
 +
**[[7uhy]] – hNUP in GATOR2 complex – Cryo EM<br />
 +
**[[8adl]] – yNUP in SEA complex – Cryo EM<br />
*Nuclear pore complex
*Nuclear pore complex
-
**[[5ijo]], [[5ijn]] – hNUP93 + NUP155 + NUP205 + NUP54 + NUP58 + NUP62 + NUP188 – Cryo EM<br />
+
**[[5ijo]], [[5ijn]], [[7per]], [[7peq]], [[7r5j]], [[7r5k]] – hNUP in pore complex – Cryo EM<br />
**[[5a9q]] – hNUP96 + NUP133 + NUP160 + NUP43 + NUP37 + NUP85 + NUP155 + NUP107 + Sec13 + Seh1 – Cryo EM<br />
**[[5a9q]] – hNUP96 + NUP133 + NUP160 + NUP43 + NUP37 + NUP85 + NUP155 + NUP107 + Sec13 + Seh1 – Cryo EM<br />
 +
**[[6lk8]], [[7fik]], [[7tdz]], [[7vop]], [[7wb4]], [[7wkk]] – fNUP in ring complex – Cryo EM<br />
 +
**[[7n84]], [[7n85]], [[7n9f]], [[7vci]], [[7woo]], [[7wot]] – yNUP in pore complex – Cryo EM<br />
-
**[[2rfo]], [[2qx5]] – yNic96<br />
 
-
**[[5hb2]] – CtNic96 <br />
 
-
**[[1gyb]] – NUP+yNTF2<br />
 
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D Structures of Nucleoporin

Updated on 15-August-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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