Porin 3D structures
From Proteopedia
(Difference between revisions)
(New page: == 3D structures of Porin == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *OmpA **3nb3 – EcOmpA + EcOmpC ...) |
|||
| (3 intermediate revisions not shown.) | |||
| Line 20: | Line 20: | ||
**[[3vzt]] – NmOmpB – ''Neisseria meningitides''<br /> | **[[3vzt]] – NmOmpB – ''Neisseria meningitides''<br /> | ||
| + | **[[7de8]] – NmOmpB (mutant) <br /> | ||
**[[3a2s]], [[3vzw]] – NmOmpB+sugars<br /> | **[[3a2s]], [[3vzw]] – NmOmpB+sugars<br /> | ||
**[[3vzu]] - NmOmpB+AMPPNP<br /> | **[[3vzu]] - NmOmpB+AMPPNP<br /> | ||
| Line 27: | Line 28: | ||
**[[2xe5]], [[2xe1]], [[2xe2]], [[2xe3]], [[2j1n]], [[2xg6]] – EcOmpC <br /> | **[[2xe5]], [[2xe1]], [[2xe2]], [[2xe3]], [[2j1n]], [[2xg6]] – EcOmpC <br /> | ||
| + | **[[7jz3]] - EcOmpC – Cryo EM<br /> | ||
**[[2zle]] - EcOmpC + protease DO – EM<br /> | **[[2zle]] - EcOmpC + protease DO – EM<br /> | ||
**[[4a8d]] - EcOmpC + DEGP – EM<br /> | **[[4a8d]] - EcOmpC + DEGP – EM<br /> | ||
| Line 35: | Line 37: | ||
*OmpF | *OmpF | ||
| - | **[[3k19]], [[3k1b]], [[2zfg]], [[2omf]], [[1opf]], [[3poq]], [[3pou]], [[3pox]], [[4jfb]], [[4lse]], [[4lsf]], [[4lsh]], [[4lsi]], [[4d5u]] – EcOmpF<br /> | + | **[[3k19]], [[3k1b]], [[2zfg]], [[2omf]], [[1opf]], [[3poq]], [[3pou]], [[3pox]], [[4jfb]], [[4lse]], [[4lsf]], [[4lsh]], [[4lsi]], [[4d5u]], [[7fdy]], [[8c7l]] – EcOmpF<br /> |
| + | **[[6wtz]] – EcOmpF – Cryo EM<br /> | ||
**[[1hxt]], [[1hxu]], [[1hxx]], [[1bt9]], [[1gfm]], [[1gfn]], [[1gfo]], [[1gfp]], [[1gfq]], [[1mpf]] – EcOmpF (mutant) <br /> | **[[1hxt]], [[1hxu]], [[1hxx]], [[1bt9]], [[1gfm]], [[1gfn]], [[1gfo]], [[1gfp]], [[1gfq]], [[1mpf]] – EcOmpF (mutant) <br /> | ||
**[[5nur]], [[5nuo]] – EcOmpF + ABC transprter permease<br /> | **[[5nur]], [[5nuo]] – EcOmpF + ABC transprter permease<br /> | ||
**[[5nuq]] – EcOmpF + MLAA<br /> | **[[5nuq]] – EcOmpF + MLAA<br /> | ||
**[[2zld]] – EcOmpF+colicin E3<br /> | **[[2zld]] – EcOmpF+colicin E3<br /> | ||
| + | **[[7nst]] – EcOmpF+colicin E9 + TolB – Cryo EM<br /> | ||
| + | **[[7nsu]] – EcOmpF+colicin E9 + TolB + BtuB – Cryo EM<br /> | ||
**[[3o0e]] - EcOmpF+colicin peptide<br /> | **[[3o0e]] - EcOmpF+colicin peptide<br /> | ||
**[[3hw9]], [[3hwb]] – EcOmpF+ions<br /> | **[[3hw9]], [[3hwb]] – EcOmpF+ions<br /> | ||
**[[3fyx]] – EcOmpF+dibenzo-18-crown-6<br /> | **[[3fyx]] – EcOmpF+dibenzo-18-crown-6<br /> | ||
| - | **[[4gcp]], [[4gcq]], [[4gcs]] – EcOmpF + antibiotic<br /> | + | **[[4gcp]], [[4gcq]], [[4gcs]], [[6zhp]], [[6zhv]] – EcOmpF + antibiotic<br /> |
**[[3nsg]] – StOmpF - ''Salmonella typhimurium''<br /> | **[[3nsg]] – StOmpF - ''Salmonella typhimurium''<br /> | ||
**[[4kr4]], [[4kr8]], [[4kra]] – StOmpF + antibiotics<br /> | **[[4kr4]], [[4kr8]], [[4kra]] – StOmpF + antibiotics<br /> | ||
| Line 50: | Line 55: | ||
*OmpG | *OmpG | ||
| - | **[[2iwv]], [[2iww]], [[2f1c]], [[4ctd]] – EcOmpG<br /> | + | **[[2iwv]], [[2iww]], [[2f1c]], [[4ctd]], [[7q5c]] – EcOmpG<br /> |
**[[2x9k]], [[2wvp]] - EcOmpG (mutant) <br /> | **[[2x9k]], [[2wvp]] - EcOmpG (mutant) <br /> | ||
| - | **[[2jqy]] – EcOmpG - NMR<br /> | + | **[[2jqy]], [[6oqh]] – EcOmpG - NMR<br /> |
*OmpK | *OmpK | ||
| - | **[[1osm]], [[6rck]] – KpOmpK36 <br /> | + | **[[1osm]], [[6rck]], [[6rcp]], [[6rd3]] – KpOmpK36 <br /> |
**[[6rcp]] – KpOmpK36 (mutant)<br /> | **[[6rcp]] – KpOmpK36 (mutant)<br /> | ||
**[[5nup]] – KpOmpK36 + ABC transporter permease<br /> | **[[5nup]] – KpOmpK36 + ABC transporter permease<br /> | ||
| + | **[[6v78]] – KpOmpK37 <br /> | ||
*OmpM | *OmpM | ||
| Line 68: | Line 74: | ||
**[[1opc]] - EcOmpR C terminal<br /> | **[[1opc]] - EcOmpR C terminal<br /> | ||
| + | |||
| + | *OmpT | ||
| + | |||
| + | **[[5oyk]], [[6ehd]], [[6ehf]] - VcOmpT – ''Vibrio cholerae''<br /> | ||
*OmpU | *OmpU | ||
| - | **[[6ehb]], [[5onu]] - VcOmpU | + | **[[6ehb]], [[5onu]] - VcOmpU <br /> |
**[[6ehc]] - VcOmpU (mutant)<br /> | **[[6ehc]] - VcOmpU (mutant)<br /> | ||
| Line 79: | Line 89: | ||
**[[2fgq]] – DaOmp32+malate<br /> | **[[2fgq]] – DaOmp32+malate<br /> | ||
**[[1e54]] – Omp32+sulfate – ''Comamonas acidovorans''<br /> | **[[1e54]] – Omp32+sulfate – ''Comamonas acidovorans''<br /> | ||
| + | |||
| + | *Omp33 | ||
| + | |||
| + | **[[6gie]] – AbOmp33 – ''Acinetobacter baumannii''<br /> | ||
*Omp35 | *Omp35 | ||
| Line 142: | Line 156: | ||
**[[3t20]] – PaOprH<br /> | **[[3t20]] – PaOprH<br /> | ||
| + | |||
| + | *OpdL | ||
| + | |||
| + | **[[2y0h]] – PaOpdL<br /> | ||
*OpdO (pyroglutatmate porin) | *OpdO (pyroglutatmate porin) | ||
| Line 169: | Line 187: | ||
**[[5nxu]] – PsOmp 1 + maltose<br /> | **[[5nxu]] – PsOmp 1 + maltose<br /> | ||
**[[4d65]] – PsOmp 2<br /> | **[[4d65]] – PsOmp 2<br /> | ||
| - | **[[4fuv]], [[5dl7]] – | + | **[[4fuv]], [[5dl7]] – AbOmp<br /> |
*Sugar-specific porin | *Sugar-specific porin | ||
| Line 179: | Line 197: | ||
**[[1mal]] – EcLamB<br /> | **[[1mal]] – EcLamB<br /> | ||
| + | **[[8b7v]] – EcLamB – Cryo EM<br /> | ||
**[[1af6]], [[1mpq]], [[1mpm]], [[1mpn]], [[1mpo]] – EcLamB+sugars<br /> | **[[1af6]], [[1mpq]], [[1mpm]], [[1mpn]], [[1mpo]] – EcLamB+sugars<br /> | ||
**[[2mpr]], [[1mpr]] – StLamB<br /> | **[[2mpr]], [[1mpr]] – StLamB<br /> | ||
| + | |||
| + | *Chitoporin | ||
| + | |||
| + | **[[7vu2]], [[7vu3]] – SmChitp + chitohexaose – ''Serratia marcescens''<br /> | ||
| + | **[[7vtz]], [[7vu0]], [[7vu1]] – EcChitp + chitohexaose <br /> | ||
| + | **[[5ndp]], [[5mdq]], [[5mds]] – VhChitp – ''Vibrio harveyi'' <br /> | ||
| + | **[[5mdo]], [[5mdr]], [[7eqm]], [[7eqr]] – VhChitp + chitohexaose <br /> | ||
| + | **[[7x5q]] – VhChitp + chitohexaose + peptide<br /> | ||
| + | **[[7x5p]] – VhChitp + chitohexaose + doxycycline<br /> | ||
Voltage-Dependent Anion Channel | Voltage-Dependent Anion Channel | ||
Current revision
3D structures of Porin
Updated on 05-September-2023
Voltage-Dependent Anion Channel
See Ion channels
