6th2

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(New page: '''Unreleased structure''' The entry 6th2 is ON HOLD until Paper Publication Authors: Mendes, V., Blaszczyk, M., Bryant, O., Cory-Wright, J., Blundell, T.L. Description: Crystal struct...)
Current revision (13:02, 24 January 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6th2 is ON HOLD until Paper Publication
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==Crystal structure of Mycobacterium smegmatis CoaB in complex with CTP==
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<StructureSection load='6th2' size='340' side='right'caption='[[6th2]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6th2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis_MC2_155 Mycolicibacterium smegmatis MC2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TH2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TH2 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.844&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CTP:CYTIDINE-5-TRIPHOSPHATE'>CTP</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6th2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6th2 OCA], [https://pdbe.org/6th2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6th2 RCSB], [https://www.ebi.ac.uk/pdbsum/6th2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6th2 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/COABC_MYCS2 COABC_MYCS2] Catalyzes two sequential steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine. In the second step the latter compound is decarboxylated to form 4'-phosphopantotheine.[HAMAP-Rule:MF_02225]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Coenzyme A (CoA) is a fundamental co-factor for all life, involved in numerous metabolic pathways and cellular processes, and its biosynthetic pathway has raised substantial interest as a drug target against multiple pathogens including Mycobacterium tuberculosis. The biosynthesis of CoA is performed in five steps, with the second and third steps being catalysed in the vast majority of prokaryotes, including M. tuberculosis, by a single bifunctional protein, CoaBC. Depletion of CoaBC was found to be bactericidal in M. tuberculosis. Here we report the first structure of a full-length CoaBC, from the model organism Mycobacterium smegmatis, describe how it is organised as a dodecamer and regulated by CoA thioesters. A high-throughput biochemical screen focusing on CoaB identified two inhibitors with different chemical scaffolds. Hit expansion led to the discovery of potent and selective inhibitors of M. tuberculosis CoaB, which we show to bind to a cryptic allosteric site within CoaB.
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Authors: Mendes, V., Blaszczyk, M., Bryant, O., Cory-Wright, J., Blundell, T.L.
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Inhibiting Mycobacterium tuberculosis CoaBC by targeting an allosteric site.,Mendes V, Green SR, Evans JC, Hess J, Blaszczyk M, Spry C, Bryant O, Cory-Wright J, Chan DS, Torres PHM, Wang Z, Nahiyaan N, O'Neill S, Damerow S, Post J, Bayliss T, Lynch SL, Coyne AG, Ray PC, Abell C, Rhee KY, Boshoff HIM, Barry CE 3rd, Mizrahi V, Wyatt PG, Blundell TL Nat Commun. 2021 Jan 8;12(1):143. doi: 10.1038/s41467-020-20224-x. PMID:33420031<ref>PMID:33420031</ref>
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Description: Crystal structure of Mycobacterium smegmatis CoaB in complex with CTP
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Blundell, T.L]]
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<div class="pdbe-citations 6th2" style="background-color:#fffaf0;"></div>
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[[Category: Mendes, V]]
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== References ==
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[[Category: Cory-Wright, J]]
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<references/>
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[[Category: Blaszczyk, M]]
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__TOC__
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[[Category: Bryant, O]]
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Mycolicibacterium smegmatis MC2 155]]
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[[Category: Blaszczyk M]]
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[[Category: Blundell TL]]
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[[Category: Bryant O]]
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[[Category: Cory-Wright J]]
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[[Category: Mendes V]]

Current revision

Crystal structure of Mycobacterium smegmatis CoaB in complex with CTP

PDB ID 6th2

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