5jcv
From Proteopedia
(Difference between revisions)
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<StructureSection load='5jcv' size='340' side='right'caption='[[5jcv]], [[Resolution|resolution]] 2.23Å' scene=''> | <StructureSection load='5jcv' size='340' side='right'caption='[[5jcv]], [[Resolution|resolution]] 2.23Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5jcv]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5jcv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JCV FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.23Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | < | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jcv OCA], [https://pdbe.org/5jcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jcv RCSB], [https://www.ebi.ac.uk/pdbsum/5jcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jcv ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/SRTB_LISMO SRTB_LISMO] Transpeptidase that anchors surface proteins to the cell wall (Probable) (PubMed:16247833, PubMed:19129190). Recognizes and modifies its substrate by proteolytic cleavage of a C-terminal sorting signal. Following cleavage, a covalent intermediate is formed via a thioester bond between the sortase and its substrate, which is then transferred and covalently attached to the cell wall (Probable). Catalyzes a cell wall sorting reaction in which a surface protein with the consensus sorting signal NP(Q/K)(T/S)(N/G/S)(D/A) is cleaved between the fourth and fifth residues, and the fourth position is linked to the cell wall (Probable) (PubMed:19129190). This is not the major sortase in Listeria, it seems to anchor only 2 proteins, Hbp2 (SvpA) and Hbp1 (PubMed:15028680, PubMed:16247833).<ref>PMID:15028680</ref> <ref>PMID:16247833</ref> <ref>PMID:19129190</ref> <ref>PMID:15028680</ref> <ref>PMID:16247833</ref> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Listeria monocytogenes EGD-e]] |
| - | [[Category: Anderson | + | [[Category: Anderson WF]] |
| - | + | [[Category: Grimshaw S]] | |
| - | [[Category: Grimshaw | + | [[Category: Joachimiak A]] |
| - | [[Category: Joachimiak | + | [[Category: Osipiuk J]] |
| - | [[Category: Osipiuk | + | [[Category: Zhou M]] |
| - | [[Category: Zhou | + | |
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Current revision
Sortase B from Listeria monocytogenes.
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