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| <StructureSection load='5vqm' size='340' side='right'caption='[[5vqm]], [[Resolution|resolution]] 2.79Å' scene=''> | | <StructureSection load='5vqm' size='340' side='right'caption='[[5vqm]], [[Resolution|resolution]] 2.79Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5vqm]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Clodr Clodr] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VQM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VQM FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5vqm]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_R20291 Clostridioides difficile R20291] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VQM FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tcdB, CDR20291_0582 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=645463 CLODR])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.79Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vqm OCA], [http://pdbe.org/5vqm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vqm RCSB], [http://www.ebi.ac.uk/pdbsum/5vqm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vqm ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vqm OCA], [https://pdbe.org/5vqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vqm RCSB], [https://www.ebi.ac.uk/pdbsum/5vqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vqm ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/S6B291_HUMAN S6B291_HUMAN] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Clodr]] | + | [[Category: Clostridioides difficile R20291]] |
- | [[Category: Human]] | + | [[Category: Homo sapiens]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Kroh, H K]] | + | [[Category: Kroh HK]] |
- | [[Category: Lacy, D B]] | + | [[Category: Lacy DB]] |
- | [[Category: Spiller, B W]] | + | [[Category: Spiller BW]] |
- | [[Category: Toxin antibody]]
| + | |
- | [[Category: Toxin-immune system complex]]
| + | |
| Structural highlights
Function
S6B291_HUMAN
Publication Abstract from PubMed
Clostridium difficile infection (CDI) is the leading cause of hospital-acquired diarrhea and is mediated by the actions of two toxins, TcdA and TcdB. The toxins perturb host cell function through a multi-step process of receptor binding, endocytosis, low pH-induced pore formation, and the translocation and delivery of an N-terminal glucosyltransferase domain (GTD) that inactivates host GTPases. Infection studies with isogenic strains having defined toxin deletions have established TcdB as an important target for therapeutic development. Monoclonal antibodies that neutralize TcdB function have been shown to protect against CDI in animal models and reduce recurrence in humans. Here, we report the mechanism of TcdB neutralization by PA41, a humanized monoclonal antibody capable of neutralizing TcdB from a diverse array of C. difficile strains. Through a combination of structural, biochemical and cell functional studies, involving X-ray crystallography and EM, we show that PA41 recognizes a single, highly conserved epitope on the TcdB GTD and blocks productive translocation and delivery of the enzymatic cargo into the host cell. Our study reveals a unique mechanism of C. difficile toxin neutralization by a monoclonal antibody, which involves targeting a process that is conserved across the large clostridial glucosylating toxins. The PA41 antibody described here provides a valuable tool for dissecting the mechanism of toxin pore formation and translocation across the endosomal membrane.
A neutralizing antibody that blocks delivery of the enzymatic cargo of Clostridium difficile toxin TcdB into host cells.,Kroh HK, Chandrasekaran R, Zhang Z, Rosenthal K, Woods R, Jin X, Nyborg AC, Rainey GJ, Warrener P, Melnyk RA, Spiller BW, Lacy DB J Biol Chem. 2017 Nov 27. pii: M117.813428. doi: 10.1074/jbc.M117.813428. PMID:29180448[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Kroh HK, Chandrasekaran R, Zhang Z, Rosenthal K, Woods R, Jin X, Nyborg AC, Rainey GJ, Warrener P, Melnyk RA, Spiller BW, Lacy DB. A neutralizing antibody that blocks delivery of the enzymatic cargo of Clostridium difficile toxin TcdB into host cells. J Biol Chem. 2017 Nov 27. pii: M117.813428. doi: 10.1074/jbc.M117.813428. PMID:29180448 doi:http://dx.doi.org/10.1074/jbc.M117.813428
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