Ribonuclease

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<StructureSection load="1rta" size="350" color="" spin="on" Scene= caption='Ribonuclease A (magenta) complex with thymidylic acid DNA tetramer (pink), [[1rta]]' >
<StructureSection load="1rta" size="350" color="" spin="on" Scene= caption='Ribonuclease A (magenta) complex with thymidylic acid DNA tetramer (pink), [[1rta]]' >
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== Function ==
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== Function ==
'''Ribonuclease''' (RNase) degrades RNA. The '''endonucleases''' cleave single or double stranded RNA. '''Exo-RNases''' remove terminal nucleotide from the ends of the RNA molecule. <br />
'''Ribonuclease''' (RNase) degrades RNA. The '''endonucleases''' cleave single or double stranded RNA. '''Exo-RNases''' remove terminal nucleotide from the ends of the RNA molecule. <br />
* '''RNase A''' or '''RNase I''' endonuclease which cleaves C or U of single-stranded RNA (ssRNA)<ref>PMID:15676279</ref>. For details see [[RNase A]], [[RNase A Oligomers]], [[Ribonuclease A Catalysis]], [[RNaseA Nobel Prizes]], [[User:R. Jeremy Johnson/RNaseA]] and [[RNase A NMR]].<br />
* '''RNase A''' or '''RNase I''' endonuclease which cleaves C or U of single-stranded RNA (ssRNA)<ref>PMID:15676279</ref>. For details see [[RNase A]], [[RNase A Oligomers]], [[Ribonuclease A Catalysis]], [[RNaseA Nobel Prizes]], [[User:R. Jeremy Johnson/RNaseA]] and [[RNase A NMR]].<br />
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* '''RNase L''' activates the inflammasome during viral infection<ref>PMID:25816776</ref>.<br />
* '''RNase L''' activates the inflammasome during viral infection<ref>PMID:25816776</ref>.<br />
* '''RNase MC1''' from bitter gourd has a preference for cleavage at the 5'-end of uridine<ref>PMID:10964705</ref>.<br />
* '''RNase MC1''' from bitter gourd has a preference for cleavage at the 5'-end of uridine<ref>PMID:10964705</ref>.<br />
 +
* '''RNase MRP''' processes RNA from the mitochondrial displacement loop-containing region<ref>PMID:7688115</ref>.<br />
* ''' RNase P''' is an endonuclease which is a ribozyme<ref>PMID:14580343</ref>. For details see [[RNase P]], [[RNase P Nobel Prizes]].<br />
* ''' RNase P''' is an endonuclease which is a ribozyme<ref>PMID:14580343</ref>. For details see [[RNase P]], [[RNase P Nobel Prizes]].<br />
* '''RNase PH''' is an exonuclease involved in the trimming of the 3' terminus of tRNA<ref>PMID:2455297</ref>.<br />
* '''RNase PH''' is an exonuclease involved in the trimming of the 3' terminus of tRNA<ref>PMID:2455297</ref>.<br />
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* '''Binase''' is a microbial RNase which cleaves endonucleolyticly ssRNA<ref>PMID:25551440</ref>.<br />
* '''Binase''' is a microbial RNase which cleaves endonucleolyticly ssRNA<ref>PMID:25551440</ref>.<br />
* '''Poly(A)-specific RNase''' cleaves exonucleolyticly the poly(A) tail<ref>PMID:23912222</ref>.<br />
* '''Poly(A)-specific RNase''' cleaves exonucleolyticly the poly(A) tail<ref>PMID:23912222</ref>.<br />
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For more details on RNase A see:<br />
+
* '''NanoRNase''' cleaves RNA fragments of 2-5 nucleotides which are generated by RNA degradation<ref>PMID:28894100</ref>.<br />
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<br />
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* '''MiniRNase''' RNase with the catalytic domain but lacking the specificity domain<ref>PMID:21135215</ref>.<br />
== Relevance ==
== Relevance ==
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</StructureSection>
</StructureSection>
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== 3D Structures of Ribonuclease ==
 
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 
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{{#tree:id=OrganizedByTopic|openlevels=0|
 
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*RNase I or RNase A
 
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**[[4kxh]] - hRNase I - human<br />
 
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**[[3f8g]], [[2e0j]], [[2e0l]], [[2e0m]], [[2e0o]], [[1h8x]], [[1e21]], [[1dza]] - hRNase I pancreatic (mutant) <br />
 
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**[[2k11]] - hRNase I pancreatic - NMR<br />
 
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**[[3mwq]], [[3mx8]], [[3i67]], [[3i6f]], [[3i6h]], [[3i6j]], [[3i7w]], [[3eux]], [[3euy]], [[3euz]], [[3ev0]], [[3ev1]], [[3ev2]], [[3ev3]], [[3ev4]], [[3ev5]], [[3ev6]], [[3dh5]], [[2e3w]], [[2g4w]], [[2g4x]], [[2gbq]], [[2blp]], [[2blz]], [[2jvt]], [[1jvv]], [[1jvt]], [1js0]], [[1fs3]], [[1kf2]], [[1kf3]], [[1kf4]], [[1kf5]], [[1kf7]], [[1kf8]], [[1aqp]], [[1a2w]], [[1rnw]], [[1rnz]], [[1rno]], [[1rnq]], [[1rbx]], [[1ssc]], [[3srn]], [[4srn]], [[1srn]], [[5rsa]], [[1afu]], [[1bel]], [[1c0b]], [[1c0c]], [[1lsq]], [[1rat]], [[1rbn]], [[1rha]], [[1rhb]], [[1rnx]], [[1rny]], [[1rsm]], [[1xps]], [[1xpt]], [[2g8q]], [[2rat]], [[3mzq]], [[3mzr]], [[3rat]], [[3rn3]], [[4rat]], [[5rat]], [[6rat]], [[7rat]], [[7rsa]], [[8rat]], [[8rsa]], [[9rat]], [[9rsa]], [[3mwr]], [[4ao1]], [[4j5z]], [[4j60]], [[4j61]], [[4j62]], [[4j63]], [[4j64]], [[4j65]], [[4j66]], [[4j67]], [[4j68]], [[4j69]], [[4j6a]], [[4mxf]], [[4ooh]], [[4ot4]], [[4qh3]], [[4rte]], [[4s0q]], [[4s18]], [[5d6u]], [[5jmg]], [[5jml]], [[5na9]], [[5obc]], [[5obd]], [[5obe]], [[4srn]], [[6etr]], [[6etq]], [[6etp]], [[6eto]], [[6etn]], [[6etm]], [[6etl]], [[6etk]] - bRNase I pancreatic - bovine<br />
 
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**[[3a1r]], [[4zz4]], [[5d97]], [[5rsa]], [[6rsa]] - bRNase I pancreatic - neutron<br />
 
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**[[2aas]] - bRNase I pancreatic - NMR<br />
 
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**[[3i7x]], [[3i7y]], [[3fkz]], [[3fl3]], [[3dh6]], [[3di7]], [[3di8]], [[3di9]], [[3dib]], [[3dic]], [[2oqf]], [[3bcm]], [[3bco]], [[3bcp]], [[2nui]], [[2op2]], [[1ymn]], [[1ymr]], [[1ymw]], [[2apq]], [[1izp]], [[1izq]], [[1izr]], [[1kh8]], [[1c8w]], [[1eic]], [[1eid]], [[1eie]], [[1dy5]], [[3rsd]], [[3rsk]], [[1ssa]], [[1ssb]], [[1a5p]], [[1a5q]], [[1c9v]], [[1c9x]], [[3rsp]], [[4rsd]], [[3ql1]], [[3ql2]], [[3rh1]], [[3rid]], [[4o36]], [[4o37]], [[4k7m]], [[4k7l]], [[4okf]] - bRNase I pancreatic (mutant)<br />
 
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**[[1rar]], [[1ras]] - bRNase I pancreatic fluoroscent<br />
 
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**[[6qmn]] - RNase I pancreatic - bison<br />
 
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**[[1rra]] - RNase I - rat<br />
 
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**[[3ljd]], [[3ln8]], [[2vq8]], [[2vq9]] - ZeRNase I - Zebrafish<br />
 
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**[[2pqx]], [[2pqy]] - EcRNase I - ''Escherichia coli''<br />
 
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*''RNase I complex''
 
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**[[1z7x]] - hRNase I pancreatic + inhibitor<br />
 
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**[[3lxo]], [[3jw1]], [[3djo]], [[3djp]], [[3djq]], [[3djv]], [[3djx]], [[3dxg]], [[3dxh]], [[2w5g]], [[2w5i]], [[2w5k]], [[2w5l]], [[2w5m]], [[3d6o]], [[3d6p]], [[3d6q]], [[3d7b]], [[3d8y]], [[3d8z]], [[2pca]], [[2g8r]], [[1z6d]], [[1z6s]], [[1u1b]], [[1w4o]], [[1w4p]], [[1w4q]], [[1wbu]], [[1o0f]], [[1jn4]], [[1jvu]], [[1f0v]], [[1ruv]], [[1rnm]], [[1rnn]], [[1rbw]], [[1rca]], [[1rpf]], [[1rpg]], [[1rph]], [[1rnc]], [[1rnd]], [[1rob]], [[1rta]], [[1rtb]], [[1afk]], [[1afl]], [[1eos]], [[1eow]], [[1o0h]], [[1o0m]], [[1o0n]], [[1o0o]], [[1qhc]], [[1rcn]], [[2qca]], [[5ogh]] - bRNase I pancreatic + nucleotide<br />
 
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**[[6rsa]] - bRNase I pancreatic + nucleotide - neutron<br />
 
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**[[3fl0]], [[3fl1]], [[4rsk]], [[5et4]], [[4wyp]], [[4wyz]] - bRNase I pancreatic (mutant) + nucleotide <br />
 
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**[[2xog]], [[2xoi]], [[2q4g]], [[1dfj]], [[4g8v]], [[4g8y]], [[4g90]], [[5e5e]], [[5e5f]], [[5jlg]], [[6gok]], [[6f60]], [[5old]], [[5nj7]], [[6pvx]], [[6pvw]], [[6pvv]], [[6pvu]] - bRNase I pancreatic + inhibitor<br />
 
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**[[4peq]] - bRNase I pancreatic + inhibitor protein<br />
 
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**[[2p42]], [[2p43]], [[2p44]], [[2p45]], [[2p46]], [[2p47]], [[2p48]], [[2p49]], [[2p4a]], [[1bzq]], [[3qsk]], [[4pou]] - bRNase I + antibody<br />
 
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**[[2e33]] - bRNase I + F-box only protein 2<br />
 
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**[[4l55]] - bRNase I + aziru<br />
 
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**[[6qe9]] - bRNase I + Pt<br />
 
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**[[3tsr]] - mRNase I + inhibitor - mouse<br />
 
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**[[4per]] - RNase I pancreatic + inhibitor protein - chicken<br />
 
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**[[2z70]], [[2ea1]] - EcRNase I + DNA<br />
 
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*RNase II
 
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**[[2bex]] - hRNase II + RNase inhibitor protein<br />
 
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**[[2bzz]], [[2c01]], [[2c02]], [[2c05]] - hRNase II + inhibitor<br />
 
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**[[1m58]], [[1km8]], [[1km9]] - BuRNase II - Bullfrog<br />
 
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**[[1bc4]] - BuRNase II - NMR<br />
 
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**[[1m07]] - BuRNase II + DNA<br />
 
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**[[2ix0]], [[2id0]] - EcRNase II<br />
 
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**[[2ix1]] - EcRNase II (mutant)<br />
 
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*RNase III
 
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**[[1dyt]], [[1qmt]], [[2khx]] - hRNase III <br />
 
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**[[2kb5]] - hRNase III - NMR<br />
 
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**[[1h1h]] - hRNase III + nucleotide<br />
 
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**[[1z5f]] - BuRNase III<br />
 
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**[[1t4n]], [[1t4o]] - yRNase III - yeast - NMR<br />
 
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**[[2luq]] - yRNase III RNA-binding domain <br />
 
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**[[2lup]], [[4oog]], [[5t16]] - yRNase III RNA-binding domain + RNA <br />
 
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**[[2lbs]], [[1t4l]] - yRNase III RNA-binding domain + RNA - NMR<br />
 
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**[[2nue]], [[2nuf]], [[2nug]], [[1yyk]], [[1yyw]], [[4m2z]], [[4m30]] - AaRNase III + RNA - ''Aquifex aeolicus''<br />
 
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**[[2ez6]], [[1yyo]], [[1yz9]], [[1rc7]] - AaRNase III (mutant) + RNA<br />
 
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**[[1rc5]], [[1i4s]], [[1jfz]] - AaRNase III N terminal<br />
 
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**[[2a11]] - MtRNase III - ''Mycobacterium tuberculosis''<br />
 
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**[[1o0w]] - TmRNase III - ''Thermotoga maritima''<br />
 
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**[[3n3w]], [[3o2r]] - RNase III nuclease domain - ''Campylobacter jejuni''<br />
 
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*RNase III Dicer
 
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**[[4ngg]], [[4ngf]], [[4nha]] – hDicer platform-PAZ-connector helix cassette residues 765-1065 + RNA<br />
 
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**[[4ngb]], [[4ngc]], [[4ngd]], [[4ngf]], [[4ngg]], [[4nh3]], [[4nh5]], [[4nh6]], [[4nha]] – hDicer platform-PAZ-connector helix cassette (mutant) + RNA<br />
 
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**[[2eb1]] – hDicer C terminal <br />
 
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**[[4wyq]] – hDicer residues 267-389 + polypeptide +TARBP2<br />
 
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**[[3c4b]], [[3c4t]] – mDicer RNase III+dsRNA binding domains <br />
 
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**[[2l6m]] - Dicer residues 1259-1358 - fission yeast - NMR<br />
 
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**[[2ff1]] - Dicer - ''Giardia intestinalis''<br />
 
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*RNase 4
 
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**[[1wdy]] - hRNase 4 <br />
 
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**[[2rnf]], [[1rnf]], [[5ark]] - hRNase 4 + nucleotide<br />
 
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**[[5ar6]] - pRNase 4 - pig<br />
 
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**[[5arj]] - pRNase 4 (mutant)<br />
 
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**[[5arl]] - pRNase 4 (mutant) + nucleotide<br />
 
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**[[1kvz]] - BuRNase 4 - NMR<br />
 
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*RNase 5 or angiogenin
 
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**[[4aoh]] - hRNase 5 <br />
 
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**[[1un3]], [[1un4]], [[1un5]], [[1gv7]], [[4ahd]], [[4ahe]], [[4ahf]], [[4ahg]], [[4ahh]], [[4ahi]], [[4ahj]], [[4ahk]], [[4ahl]], [[4ahm]], [[4ahn]], [[5m9v]], [[5m9t]], [[5m9s]], [[5m9r]], [[5m9q]], [[5m9p]], [[5m9m]], [[5m9j]], [[5m9g]], [[5m9c]], [[5m9a]] - hRNase 5 (mutant)<br />
 
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**[[1h0d]] - hRNase 5 + antibody<br />
 
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**[[3lje]] - ZeRNase 5<br />
 
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*RNase 6
 
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**[[4x09]], [[6mv7]], [[6mv6]], [[5oab]], [[6enp]] - hRNase 6<br />
 
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**[[1oj1]], [[1oj8]] - BuRNase 6 + nucleotide<br />
 
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*RNase 7
 
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**[[2hky]] - hRNase 7 - NMR <br />
 
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*RNase B
 
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**[[1rbb]] - bRNase B <br />
 
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**[[1rbj]] - bRNase B + tetranucleotide <br />
 
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*RNase BA
 
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**[[1x1u]], [[1x1x]], [[1x1y]], [[1b27]], [[1b2u]], [[1b3s]], [[1x1w]] - BaRNase BA + barstar (mutant) - ''Bacillus amyloliquefaciens''<br />
 
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**[[3da7]], [[1brs]], [[1bgs]] - BaRNase BA + barstar <br />
 
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**[[1b2s]], [[2za4]] - BaRNase BA (mutant) + barstar (mutant) <br />
 
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**[[1brn]], [[2kf5]], [[2kf6]], [[1rnb]] - BaRNase BA + nucleotide<br />
 
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**[[3kch]], [[2f4y]], [[2f56]], [[2f5m]], [[2f5w]] - BaRNase BA crosslinked<br />
 
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**[[2kf3]], [[2kf4]], [[1fw7]], [[1bnr]] - BaRNase BA - NMR<br />
 
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**[[1yvs]], [[1b2x]], [[1a2p]], [[1bni]], [[1bnj]] - BaRNase BA <br />
 
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**[[1b20]], [[1b21]], [[1b2z]], [[1bne]], [[1bnf]], [[1bng]], [[1brh]], [[1bri]], [[1brj]], [[1brk]], [[1bns]], [[1brg]], [[1bsa]], [[1bsb]], [[1bsc]], [[1bsd]], [[1bse]], [[1bna]], [[1bao]] - BaRNase BA (mutant)<br />
 
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*RAase D
 
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**[[1yt3]] - EcRNase D<br />
 
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*RNase E; Domains: recognition 1-28; S1 35-125; catalytic 1-515
 
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**[[2vmk]], [[2c4r]], [[2bx2]] - EcRNase E catalytic domain<br />
 
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**[[1slj]] - EcRNase E S1 domain - NMR<br />
 
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**[[1smx]], [[1sn8]] - EcRNase E S1 domain <br />
 
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**[[2vrt]], [[2c0b]] - EcRNase E catalytic domain + RNA<br />
 
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**[[5f6c]], [[6g63]] - EcRNase E catalytic domain (mutant) + RNA<br />
 
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**[[3h8a]] - EcRNase E recognition domain + enolase<br />
 
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**[[5ohg]] - EcRNase E residues 813-850 + enolase<br />
 
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**[[4oxp]] - CcRNase E S1+ sensor domains – ''Caulobacter crescentus'' <br />
 
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*RNase F1
 
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**[[1fus]], [[1fut]] - GfRNase F1 + nucleotide - ''Gibberella fujikuroi''<br />
 
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**[[1rck]], [[1rci]] - GfRNase F1 - NMR<br />
 
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*RNase H
 
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**[[3h7i]], [[3h8s]], [[3h8w]] - T4RNase H (mutant) - Enterobacteria phage T4<br />
 
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**[[2ihn]] - T4RNase H (mutant) + DNA<br />
 
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**[[3h8j]], [[1tfr]] - T4RNase H <br />
 
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**[[4e89]] - RNase H - XMRV<br />
 
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**[[4ly7]] - RNase H - ancestral<br />
 
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**[[2rpi]], [[1ril]] - TtRNase H - ''Thermus thermophilus''<br />
 
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**[[1rbr]], [[1rbs]], [[1rbt]], [[1rbu]], [[1rbv]], [[2rn2]] - EcRNase H <br />
 
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**[[1lav]], [[1law]], [[1rda]], [[1rdb]], [[1rdc]] - EcRNase H (mutant) <br />
 
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**[[1jl2]] - EcRNase H/TtRNase H <br />
 
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**[[4z0u]] - EcRNase H + peptide<br />
 
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**[[3d0p]], [[3ey1]], [[3i8d]], [[4opj]], [[4opk]], [[5swm]] - BhRNase H (mutant) + DNA - ''Bacillus halodurans''<br />
 
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**[[1zbf]] - BhRNase H (mutant) <br />
 
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**[[6dpp]], [[6dpo]], [[6dpn]], [[6dpm]], [[6dpl]], [[6dpk]], [[6dpj]], [[6dpi]], [[6dpg]], [[6dph]], [[6dpf]], [[6dpe]], [[6dpd]], [[6dpc]], [[6dpb]], [[6dpa]], [[6dp9]], [[6dp8]] [[6dp7]], [[6dp6]], [[6dp5]], [[6dp4]], [[6dp3]], [[6dp2]], [[6dp1]], [[6dp0]], [[6doz]], [[6doy]], [[6dox]], [[6dow]], [[6dov]], [[6dou]], [[6dot]], [[6dos]], [[6dor]], [[6doq]], [[6dop]], [[6doo]], [[6don]], [[6dom]], [[6dol]], [[6dok]], [[6doj]], [[6doi]], [[6doh]], [[6dog]], [[6dof]], [[6doe]], [[6dod]], [[6doc]], [[6dob]], [[6doa]], [[6do9]], [[6do8]], [[6dmv]], [[6dmn]] - BhRNase H + RNA + DNA<br />
 
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**[[2r7y]], [[2g8f]], [[2g8h]], [[2g8i]], [[2g8k]], [[2g8u]], [[2g8v]], [[2g8w]], [[1zbi]], [[1zbl]], [[3twh]], [[3uld]], [[5us2]], [[5usa]], [[5use]], [[5usg]], [[5w7n]], [[5w7o]], [[5wjr]] - BhRNase H (mutant) + RNA + DNA<br />
 
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**[[4htu]], [[4hue]], [[4huf]], [[4hug]] - BhRNase H + DNA<br />
 
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**[[4ibn]] - uRNase H - uncultured<br />
 
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**[[4h8k]] - uRNase H + RNA + DNA<br />
 
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**[[4e7h]], [[4e7i]], [[4e7j]], [[4e7k]], [[4e7l]] - RNase H + DNA – human spumaretrovirus<br />
 
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*RNase HI
 
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**[[3bsu]] - hRNase HI catalytic domain + RNA + DNA<br />
 
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**[[2qk9]], [[2qkb]], [[2qkk]] - hRNase HI (mutant) + RNA + DNA<br />
 
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**[[1qhk]] - yRNase HI N terminal - NMR<br />
 
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**[[3h08]] - RNase HI - ''Chlorobaculum tepidum''<br />
 
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**[[3aa2]], [[3aa3]], [[3aa4]], [[3aa5]], [[2yv0]], [[2z1g]], [[2z1h]], [[2z1i]], [[2z1j]], [[1wse]], [[1wsf]], [[1wsg]], [[1wsh]], [[1wsi]], [[1wsj]], [[1jxb]], [[1jl1]], [[1f21]], [[1kva]], [[1kvb]], [[1kvc]], [[1goa]], [[1gob]], [[1goc]] - EcRNase HI (mutant) <br />
 
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**[[1g15]], [[1rdd]], [[1rnh]] - EcRNase HI <br />
 
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**[[1rch]] - EcRNase HI - NMR <br />
 
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**[[2zqb]] - SoRNase HI (mutant) - ''Shewanella oneidensis''<br />
 
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**[[2e4l]] - SoRNase HI <br />
 
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**[[2ehg]] - RNase HI - ''Sulfolobus tokodaii''<br />
 
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**[[3u3g]] - uRNase HI<br />
 
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**[[4e19]], [[4nyn]] - RNase HI - ''Halobacterium salinarium''<br />
 
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*RNase HII
 
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**[[3puf]], [[3p56]], [[3p5j]] - hRNase HII subunits α+β+γ<br />
 
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**[[3kio]] - mRNase HII subunits α+β+γ <br />
 
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**[[3p83]] - AfRNase HII + DNA polymerase sliding clamp - ''Archaeoglobus fulgidus''<br />
 
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**[[1i39]], [[1i3a]] - AfRNase HII <br />
 
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**[[3o3g]] - TmRNase HII + DNA<br />
 
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**[[3o3f]], [[3o3h]], [[4hht]] - TmRNase HII (mutant) + DNA<br />
 
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**[[2etj]] - TmRNase HII <br />
 
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**[[1x1p]], [[1io2]] - TkRNase HII - ''Thermococcus kodakarensis''<br />
 
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**[[2dfe]], [[2dff]], [[2dfh]] - TkRNase HII (mutant) <br />
 
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**[[1eke]] - MjRNase HII - ''Methanocaldococcus jannaschii''<br />
 
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**[[5y9p]] - SaRNase HII - ''Staphylococcus aureus''<br />
 
- 
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*RNase HIII
 
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**[[2d0a]], [[2d0b]], [[2d0c]] - GsRNase HIII - ''Geobacillus stearothermophilus''<br />
 
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**[[3asm]] - GsRNase HIII (mutant) <br />
 
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**[[1uax]] - PhRNase HIII - ''Pyrococcus horikoshii'' <br />
 
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**[[3vn5]] - AaRNase HIII <br />
 
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**[[4py5]] - RNase HIII + RNA + DNA – ''Thermovibrio ammonificans''<br />
 
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*RNase J
 
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**[[3bk1]] - TtRNase J <br />
 
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**[[3bk2]] - TtRNase J + nucleotide<br />
 
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**[[3zq4]] - BsRNase J1 - ''Bacillus subtilis'' <br />
 
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**[[5haa]] - MpRNase - ''Methanolobus psychrophilus''<br />
 
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**[[5hab]], [[5ws2]] - MpRNase (mutant) + RNA<br />
 
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**[[4xwt]] - DrRNase J + nucleotide - ''Deinococcus radiodurans''<br />
 
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**[[4xww]] - DrRNase J + RNA<br />
 
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**[[5a0t]], [[5a0v]] - RNase J + RNA - ''Streptomyces coelicolor''<br />
 
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**[[5vaj]] - BhRNase J + RNA + DNA<br />
 
- 
-
*RNase K6
 
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**[[5oab]] - hRNase K6 <br />
 
- 
-
*RNase L
 
- 
-
**[[4o1o]] - pRNase L + oligoadenylate + CMP - pig <br />
 
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**[[4o1p]] - pRNase L + oligoadenylate + AMPPNP <br />
 
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**[[4oav]] - pRNase L + oligoadenylate + AMPPCP + RNA<br />
 
- 
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*RNase LE
 
- 
-
**[[1dix]] - RNase LE - ''Solanum lycopersicum''<br />
 
- 
-
*RNase MAR1
 
- 
-
**[[1xn4]] - RNase MAR1 - ''Leishmania major''<br />
 
-
**[[2b34]] - RNase MAR1 - ''Caenorhabditis elegans''<br />
 
- 
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*RNase MS
 
- 
-
**[[1rms]], [[1rds]] - RNase MS - ''Aspergillus phoenicis''<br />
 
- 
-
*RNase MC1
 
- 
-
**[[1v9h]], [[1j1f]], [[1j1g]] - McRNase MC1 (mutant) + nucleotide - ''Momordica charantia''<br />
 
-
**[[1ucg]] - McRNase MC1 (mutant) <br />
 
-
**[[1uca]], [[1ucc]], [[1ucd]] - McRNase MC1 + nucleotide <br />
 
-
**[[1bk7]] - McRNase MC1 <br />
 
- 
-
*RNase NT
 
- 
-
**[[1vcz]], [[1vd1]], [[1vd3]] - NgRNase NT + nucleotide - ''Nicotiana glutinosa''<br />
 
-
**[[1iyb]] - NgRNase NW <br />
 
- 
-
*RNase P
 
- 
-
**[[4xgl]], [[4xgm]] - hRNase P<br />
 
-
**[[6ahr]] - hRNase P – cryo EM<br />
 
-
**[[6ahu]] - hRNase P + tRNA – cryo EM<br />
 
-
**[[5nfj]] - hRNase P protein 1 + SAM<br />
 
-
**[[6cwx]] - hRNase P subunits P20+P25 <br />
 
-
**[[6ahv]] - hRNase P subunit P40 <br />
 
-
**[[6agb]] - yRNase P – cryo EM<br />
 
-
**[[6ah3]] - yRNase P + tRNA + RNA – cryo EM<br />
 
-
**[[3iab]] - yRNase P subunits POP6+POP7 + RNase MRP P3 domain<br />
 
-
**[[1nz0]] - TmRNase P <br />
 
-
**[[6max]] - TmRNase P + purpurin <br />
 
-
**[[6cqc]] - TmRNase P + inhibitor<br />
 
-
**[[3q1q]], [[3q1r]] - TmRNase P + TmRNase P RNA + tRNAPhe <br />
 
-
**[[1d6t]], [[6d1r]] - SaRNase P <br />
 
-
**[[2a64]] - GsRNase P (mutant) <br />
 
-
**[[1a6f]], [[1nbs]], [[2jg4]] - BsRNase P (mutant) <br />
 
-
**[[1ts9]], [[1tsf]] - AfRNase P <br />
 
-
**[[1u9s]] - RNase P - synthetic <br />
 
-
**[[2avs]] - PfRNase P (mutant) - ''Pyrococcus furiosus'' <br />
 
-
**[[2k3r]]. [[2ki7]] - PfRNase P <br />
 
-
**[[2ljp]] - EcRNase P <br />
 
-
**[[2av5]] - PhRNase P component 2<br />
 
-
**[[1x0t]] - PhRNase P component 4<br />
 
-
**[[2zae]] - PhRNase P components 1+4<br />
 
-
**[[2czv]] - PhRNase P component 2 (mutant) +3<br />
 
-
**[[6k0a]] - MjRNase P components 1-4 + L7AE + RPR – Cryo EM<br />
 
-
**[[6k0b]] - MjRNase P components 1-4 + L7AE + tRNA + RPR – Cryo EM<br />
 
-
**[[5diz]], [[5ft9]] - RNase P2 - ''Arabidopsis thaliana''<br />
 
- 
-
*RNase PH
 
- 
-
**[[3dd6]] - RNase PH - ''Bacillus anthracis'' <br />
 
-
**[[1oyp]], [[1oyr]], [[1oys]] - BsRNase PH <br />
 
-
**[[1r6l]], [[1r6m]] - PaRNase PH - ''Pseudomonas aeruginosa''<br />
 
-
**[[3b4t]] - MtRNase PH <br />
 
-
**[[1udn]] - AaRNase PH <br />
 
-
**[[1udo]], [[1udq]], [[1uds]] - AaRNase PH (mutant)<br />
 
- 
-
*RNase PO1
 
- 
-
**[[3who]] - omRNase PO1 – oyster mushroom <br />
 
-
**[[3wr2]] - omRNase PO1 + nucleotide <br />
 
- 
-
*RNase R
 
- 
-
**[[5xgu]] - EcRNase R (mutant) <br />
 
- 
-
*RNase RH
 
- 
-
**[[1bol]] - RNase RH - ''Rhizopus niveus'' <br />
 
- 
-
*RNase S
 
- 
-
**[[3oqy]], [[3oqz]], [[3or0]], [[1z3l]], [[1z3m]], [[1z3p]], [[1y92]], [[1y94]], [[1fev]], [[1d5d]], [[1d5e]], [[1d5h]], [[2rln]], [[1qwq]], [[4n4c]] - bRNase S seminal (mutant) <br />
 
-
**[[1tq9]], [[1r5c]], [[11ba]], [[11bg]] - bRNase S + nucleotide <br />
 
-
**[[1r5d]], [[1r3m]], [[1n1x]], [[1n3z]], [[1j7z]], [[1j80]], [[1j81]], [[1j82]], [[1cjq]], [[1cjr]], [[1bsr]], [[1rbc]], [[1rbd]], [[1rbe]], [[1rbf]], [[1rbg]], [[1rbh]], [[1rbi]], [[1rnu]], [[1rnv]], [[2rns]] - bRNase S <br />
 
-
**[[1b6v]] - bRNase S/bRNase A <br />
 
-
**[[4ygw]] - bRNase S + peptide<br />
 
- 
-
*RNase S3
 
- 
-
**[[1iqq]] - RNase S3 - Japanese pear <br />
 
- 
-
*RNase SA
 
- 
-
**[[3a5e]], [[1zgx]], [[1ynv]], [[1t2h]], [[1t2i]], [[1uci]], [[1ucj]], [[1uck]], [[1ucl]], [[1i70]], [[1i8v]], [[1box]], [[4gho]], [[4j5g]], [[4j5k]] - SaRNase SA guanyl-specific (mutant) - ''Streptomyces aureofaciens'' <br />
 
-
**[[1lni]], [[1c54]], [[1rge]], [[1rgf]], [[1rgg]], [[1rgh]], [[1sar]] - SaRNase SA <br />
 
-
**[[1gmp]], [[1gmq]], [[1gmr]], [[2sar]] - SaRNase SA + nucleotide <br />
 
-
**[[1ay7]] - SaRNase SA + barstar <br />
 
-
**[[1rsn]] - SaRNase SA + cyclophosphothiolate <br />
 
-
**[[1py3]], [[1pyl]] - SaRNase SA2 <br />
 
-
**[[3dgy]], [[3dh2]], [[3d4a]], [[3d5g]], [[3d5i]] - SaRNase SA2 + nucleotide <br />
 
-
**[[1mgr]], [[1mgw]] - SaRNase SA3 <br />
 
- 
-
*RNase SF11
 
- 
-
**[[1ioo]] - RNase SF11 - ''Nicotiana alata'' <br />
 
- 
-
*RNase T
 
- 
-
**[[2is3]] - EcRNase T <br />
 
-
**[[3ngy]] - EcRNase T (mutant)<br />
 
-
**[[3ngz]] - EcRNase T (mutant) + nucleotide<br />
 
-
**[[3ngo]], [[3nh1]], [[3nh2]] - EcRNase T + nucleotide<br />
 
-
**[[3v9s]], [[3v9w]], [[3v9u]], [[3v9x]], [[3v9z]], [[3va0]], [[3va3]], [[4kaz]], [[4kb0]], [[4kb1]], [[3nh0]] - EcRNase T + DNA<br />
 
-
**[[2f96]] - PaRNase T <br />
 
- 
-
*RNase T1
 
- 
-
**[[1tto]], [[1rn1]], [[1rn4]], [[1rnt]], [[2aad]], [[2aae]] - AoRNase T1 - ''Aspergillus oryzae'' <br />
 
-
**[[1q9e]], [[1iyy]], [[1i2e]], [[1i2f]], [[1i2g]], [[1i3f]], [[1i3i]], [[1hz1]], [[1fys]], [[1fzu]], [[1ch0]], [[4bir]], [[3bir]], [[5bir]], [[1g02]], [[1hyf]], [[1trp]], [[1trq]], [[2bir]], [[4rnt]], [[5rnt]], [[6rnt]], [[7rnt]], [[8rnt]], [[9rnt]] - AoRNase T1 (mutant)<br />
 
-
**[[1lov]], [[1low]], [[1loy]], [[1i0v]], [[1i0x]], [[1b2m]], [[1rhl]], [[1bir]], [[1rgk]], [[1rgl]], [[5hoh]] - AoRNase T1 (mutant) + nucleotide<br />
 
-
**[[1bvi]], [[2bu4]], [[2hoh]], [[3hoh]], [[4hoh]], [[5hoh]], [[1gsp]], [[2gsp]]. [[3gsp]], [[4gsp]], [[5gsp]]. [[6gsp]], [[7gsp]], [[1det]], [[1rls]], [[1lra]], [[1rga]], [[1bu4]], [[1rgc]], [[3bu4]], [[4bu4]], [[5bu4]], [[3syu]], [[3urp]], [[2rnt]], [[6gsp]] - AoRNase T1 + nucleotide<br />
 
-
**[[3rnt]] - AoRNase T1 + V<br />
 
-
**[[1ygw]] - AoRNase T1 - NMR<br />
 
-
**[[5gy6]] - hRNase T1 - ''Hericium erinaceus''<br />
 
- 
-
*RNase T2
 
- 
-
**[[3t0o]] - hRNase T2<br />
 
- 
-
*RNase U2
 
- 
-
**[[3agn]], [[3ago]], [[3ahw]] - UsRNase U2 + AMP - ''Ustilago sphaerogena''<br />
 
-
**[[1rtu]] - UsRNase U2<br />
 
-
**[[3ahs]] - UsRNase U2B<br />
 
- 
-
*RNase VAP
 
- 
-
**[[6a7v]] - MtRNase C11 + B11<br />
 
-
**[[5x3t]] - MtRNase C26 + B26<br />
 
-
**[[6wzf]], [[5wz4]] - MtRNase C20<br />
 
-
**[[5sv2]] - MtRNase C21<br />
 
-
**[[5l6m]], [[5k8j]] - CcRNase C + B<br />
 
-
**[[5l6l]] - CcRNase C + B + DNA<br />
 
-
**[[5h4h]], [[5h4g]] - PhRNase C4<br />
 
- 
-
*RNase Z
 
- 
-
**[[3v32]], [[3v33]], [[3v34]] - hRNase Z<br />
 
-
**[[5mtz]] - yRNase Z<br />
 
-
**[[2e7y]] - TmRNase Z<br />
 
-
**[[2fk6]], [[4gcw]] - BsRNase Z (mutant) + tRNA Thr<br />
 
-
**[[1y44]] - BsRNase Z (mutant) <br />
 
-
**[[2cbn]] - EcRNase Z<br />
 
- 
-
*RNase ZC3H12A
 
- 
-
**[[5h9v]], [[5h9w]] - mRNase ZC PIN domain<br />
 
- 
-
*RNase α-sarcin
 
- 
-
**[[1de3]] - AgRNase αs - ''Aspergillus giganteus''<br />
 
-
**[[1r4y]] - AgRNase αs (mutant)<br />
 
- 
-
*Oligoribonuclease
 
- 
-
**[[2igi]], [[1yta]] - EcORNase<br />
 
-
**[[2gbz]] - ORNase - ''Xanthomonas campestris''<br />
 
-
**[[1j9a]] - HiORNase - ''Haemophilus influenza''<br />
 
-
**[[6nkl]] - HiORNase + VAPB1<br />
 
-
**[[3tr8]] - CbORNase - ''Coxiella burnetii''<br />
 
-
**[[5cy4]] - ORNase - ''Acinetobacter baumannii''<br />
 
- 
-
*NanoRNase or bifunctional oligoribonuclease and PAP phosphatase nRNA
 
- 
-
**[[5j21]] - BsNNase - ''Bacillus subtilis''<br />
 
-
**[[5ipp]], [[5iuf]] - BsNNase (mutant) + nucleotide <br />
 
-
**[[5izo]] - BsNNase (mutant) <br />
 
-
**[[5cet]] - MtNNase <br />
 
- 
-
*Polynucleotide phosphorylase
 
- 
-
**[[3cdi]] - EcPNPase<br />
 
-
**[[3gll]] - EcPNPase core<br />
 
-
**[[3cdj]] - EcPNPase C terminal truncated<br />
 
-
**[[1sro]] - EcPNPase RNA-binding domain - NMR<br />
 
-
**[[3gcm]], [[3gme]], [[3h1c]] - EcPNPase + RNase E recognition domain<br />
 
-
**[[1e3h]], [[1e3p]] - PNPase - ''Streptomyces antibioticus''<br />
 
-
**[[3h36]] - PNPase fragment - ''Streptomyces mutans''<br />
 
-
**[[4nbq]] - CbPNPase<br />
 
-
**[[4am3]] - PNPase + RNA - ''Caulobacter vibrioides''<br />
 
- 
-
*Binase
 
- 
-
**[[1gou]], [[1gov]], [[1goy]] - BiBinase - ''Bacillus intermedius''<br />
 
-
**[[2rbi]], [[4haa]] - BiBinase (mutant)<br />
 
-
**[[1buj]] - BiBinase - NMR<br />
 
- 
-
*Poly(A)-specific RNase
 
- 
-
**[[2a1s]] - hParn <br />
 
-
**[[2a1r]], [[3ctr]] - hParn + nucleotide<br />
 
-
**[[1ug8]] - mParn R3H domain - NMR<br />
 
-
**[[1whv]] - mParn RNA-binding domain - NMR<br />
 
-
**[[2rok]] - mParn CAP-binding domain - NMR<br />
 
-
**[[3d45]] - mParn + nucleotide<br />
 
-
**[[4q8g]], [[4q8h]] - yParn catalytic subunit <br />
 
-
**[[4xr7]] - yParn regulatory+catalytic subunits<br />
 
-
**[[4bwk]] - NcParn regulatory subunit – ''Neurospora crassa''<br />
 
-
**[[4bwx]] - NcParn regulatory subunit (mutant)<br />
 
-
**[[4czv]], [[4czw]] - NcParn catalytic subunit <br />
 
-
**[[4czx]], [[4czy]] - NcParn regulatory+catalytic subunits<br />
 
-
**[[4bwp]] - Parn regulatory subunit – ''Drosophila melanogaster''<br />
 
- 
-
*RNase pop2
 
- 
-
**[[4b8a]] - yRNase pop2 + cell division cycle protein 39<br />
 
-
**[[4b8c]] - yRNase pop2 + cell division cycle protein 39 + CCR4<br />
 
- 
-
*Other RNases
 
- 
-
**[[2zpo]] - RNase - ''Chelonia mydas''<br />
 
-
**[[3a4y]], [[3idz]], [[3ie0]], [[3ie2]] - TtRNase (mutant) - ''Thermus thermophilus''<br />
 
-
**[[3iek]] - TtRNase<br />
 
-
**[[3ie1]], [[3iem]] - TtRNase (mutant)<br />
 
-
**[[3iel]] - TtRNase + nucleotide<br />
 
-
**[[6of4]], [[6of3]], [[6of2]] - RNase + Clp1_P domain-containing protein - ''Chaetomium thermophilum''<br />
 
-
}}
 
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

Ribonuclease A (magenta) complex with thymidylic acid DNA tetramer (pink), 1rta

Drag the structure with the mouse to rotate

References

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