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| | <StructureSection load='4xz5' size='340' side='right'caption='[[4xz5]], [[Resolution|resolution]] 2.60Å' scene=''> | | <StructureSection load='4xz5' size='340' side='right'caption='[[4xz5]], [[Resolution|resolution]] 2.60Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4xz5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Hydcu Hydcu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XZ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XZ5 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4xz5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Hydrogenovibrio_crunogenus_XCL-2 Hydrogenovibrio crunogenus XCL-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XZ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XZ5 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.596Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tcr_1545 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=317025 HYDCU])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Carbonate_dehydratase Carbonate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.1 4.2.1.1] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xz5 OCA], [https://pdbe.org/4xz5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xz5 RCSB], [https://www.ebi.ac.uk/pdbsum/4xz5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xz5 ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xz5 OCA], [http://pdbe.org/4xz5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xz5 RCSB], [http://www.ebi.ac.uk/pdbsum/4xz5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xz5 ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/Q31FD6_HYDCU Q31FD6_HYDCU] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Carbonate dehydratase]] | + | [[Category: Hydrogenovibrio crunogenus XCL-2]] |
| - | [[Category: Hydcu]]
| + | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Diaz-Torres, N A]] | + | [[Category: Diaz-Torres NA]] |
| - | [[Category: Mahon, B P]] | + | [[Category: Mahon BP]] |
| - | [[Category: McKenna, R]] | + | [[Category: McKenna R]] |
| - | [[Category: Pinard, M A]] | + | [[Category: Pinard MA]] |
| - | [[Category: Carbonic anhydrase]]
| + | |
| - | [[Category: Co2 sequestration]]
| + | |
| - | [[Category: Lyase]]
| + | |
| - | [[Category: Thermostability]]
| + | |
| - | [[Category: Thiomicrospira crunogena xcl-2]]
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| Structural highlights
Function
Q31FD6_HYDCU
Publication Abstract from PubMed
Biocatalytic CO2 sequestration to reduce greenhouse-gas emissions from industrial processes is an active area of research. Carbonic anhydrases (CAs) are attractive enzymes for this process. However, the most active CAs display limited thermal and pH stability, making them less than ideal. As a result, there is an ongoing effort to engineer and/or find a thermostable CA to fulfill these needs. Here, the kinetic and thermal characterization is presented of an alpha-CA recently discovered in the mesophilic hydrothermal vent-isolate extremophile Thiomicrospira crunogena XCL-2 (TcruCA), which has a significantly higher thermostability compared with human CA II (melting temperature of 71.9 degrees C versus 59.5 degrees C, respectively) but with a tenfold decrease in the catalytic efficiency. The X-ray crystallographic structure of the dimeric TcruCA shows that it has a highly conserved yet compact structure compared with other alpha-CAs. In addition, TcruCA contains an intramolecular disulfide bond that stabilizes the enzyme. These features are thought to contribute significantly to the thermostability and pH stability of the enzyme and may be exploited to engineer alpha-CAs for applications in industrial CO2 sequestration.
Structural and biophysical characterization of the alpha-carbonic anhydrase from the gammaproteobacterium Thiomicrospira crunogena XCL-2: insights into engineering thermostable enzymes for CO2 sequestration.,Diaz-Torres NA, Mahon BP, Boone CD, Pinard MA, Tu C, Ng R, Agbandje-McKenna M, Silverman D, Scott K, McKenna R Acta Crystallogr D Biol Crystallogr. 2015 Aug 1;71(Pt 8):1745-56. doi:, 10.1107/S1399004715012183. Epub 2015 Jul 31. PMID:26249355[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Diaz-Torres NA, Mahon BP, Boone CD, Pinard MA, Tu C, Ng R, Agbandje-McKenna M, Silverman D, Scott K, McKenna R. Structural and biophysical characterization of the alpha-carbonic anhydrase from the gammaproteobacterium Thiomicrospira crunogena XCL-2: insights into engineering thermostable enzymes for CO2 sequestration. Acta Crystallogr D Biol Crystallogr. 2015 Aug 1;71(Pt 8):1745-56. doi:, 10.1107/S1399004715012183. Epub 2015 Jul 31. PMID:26249355 doi:http://dx.doi.org/10.1107/S1399004715012183
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