4zdp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:16, 27 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4zdp' size='340' side='right'caption='[[4zdp]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='4zdp' size='340' side='right'caption='[[4zdp]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4zdp]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZDP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4zdp]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZDP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PLR:(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL+DIHYDROGEN+PHOSPHATE'>PLR</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.703&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3hl2|3hl2]], [[4zdo|4zdo]], [[4zdl|4zdl]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLR:(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL+DIHYDROGEN+PHOSPHATE'>PLR</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SEPSECS, TRNP48 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zdp OCA], [https://pdbe.org/4zdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zdp RCSB], [https://www.ebi.ac.uk/pdbsum/4zdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zdp ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/O-phospho-L-seryl-tRNA(Sec):L-selenocysteinyl-tRNA_synthase O-phospho-L-seryl-tRNA(Sec):L-selenocysteinyl-tRNA synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.9.1.2 2.9.1.2] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zdp OCA], [http://pdbe.org/4zdp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zdp RCSB], [http://www.ebi.ac.uk/pdbsum/4zdp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zdp ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SPCS_HUMAN SPCS_HUMAN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 27:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: French, R L]]
+
[[Category: French RL]]
-
[[Category: Simonovic, M]]
+
[[Category: Simonovic M]]
-
[[Category: Mutation]]
+
-
[[Category: Pyridoxal phosphate]]
+
-
[[Category: Selenocysteine]]
+
-
[[Category: Transferase-rna complex]]
+
-
[[Category: Trna]]
+

Current revision

The crystal structure of Y334C mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec)

PDB ID 4zdp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools